Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031363 | Potato | plastid | 87.68 | 88.56 |
| Solyc03g083730.1.1 | Tomato | nucleus | 83.25 | 84.08 |
| PGSC0003DMT400072092 | Potato | endoplasmic reticulum, extracellular, vacuole | 77.83 | 79.8 |
| PGSC0003DMT400031359 | Potato | endoplasmic reticulum, extracellular | 70.94 | 74.61 |
| VIT_16s0022g00870.t01 | Wine grape | endoplasmic reticulum, extracellular | 57.14 | 58.0 |
| VIT_16s0022g00860.t01 | Wine grape | extracellular | 54.68 | 55.22 |
| VIT_16s0022g00830.t01 | Wine grape | endoplasmic reticulum, extracellular | 54.68 | 54.95 |
| VIT_16s0022g00840.t01 | Wine grape | endoplasmic reticulum, extracellular | 54.68 | 54.95 |
| CDX87244 | Canola | plastid | 50.25 | 51.26 |
| Bra035897.1-P | Field mustard | plastid | 49.26 | 50.25 |
| CDY16779 | Canola | plastid | 49.26 | 50.25 |
| CDX86901 | Canola | endoplasmic reticulum, extracellular, plastid | 49.26 | 50.0 |
| Bra010076.1-P | Field mustard | endoplasmic reticulum, extracellular | 48.28 | 49.49 |
| CDY00279 | Canola | endoplasmic reticulum, extracellular | 48.28 | 49.49 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 48.28 | 48.28 |
| KRH39988 | Soybean | endoplasmic reticulum, extracellular | 48.28 | 47.34 |
| KRH23798 | Soybean | plastid | 46.31 | 46.53 |
| PGSC0003DMT400028031 | Potato | extracellular | 42.36 | 43.88 |
| PGSC0003DMT400055550 | Potato | extracellular | 41.38 | 43.75 |
| PGSC0003DMT400012073 | Potato | plastid | 39.41 | 43.72 |
| GSMUA_Achr5P19900_001 | Banana | endoplasmic reticulum, vacuole | 43.84 | 42.58 |
| PGSC0003DMT400028042 | Potato | endoplasmic reticulum, extracellular | 40.39 | 39.23 |
| GSMUA_Achr1P04190_001 | Banana | extracellular | 39.41 | 39.22 |
| GSMUA_Achr4P24680_001 | Banana | endoplasmic reticulum, mitochondrion, plastid, vacuole | 41.38 | 38.71 |
| PGSC0003DMT400007510 | Potato | extracellular | 34.98 | 36.6 |
| PGSC0003DMT400035274 | Potato | extracellular | 33.0 | 35.45 |
| PGSC0003DMT400003231 | Potato | mitochondrion | 27.09 | 34.16 |
| PGSC0003DMT400032573 | Potato | cytosol | 17.73 | 32.73 |
| PGSC0003DMT400067636 | Potato | cytosol | 28.08 | 32.57 |
| PGSC0003DMT400049198 | Potato | extracellular | 33.5 | 32.38 |
| PGSC0003DMT400066783 | Potato | extracellular | 31.53 | 31.07 |
| Zm00001d032495_P001 | Maize | extracellular | 32.51 | 30.14 |
| PGSC0003DMT400028038 | Potato | endoplasmic reticulum, extracellular | 28.57 | 30.05 |
| TraesCS1D01G178200.1 | Wheat | extracellular | 31.53 | 29.77 |
| TraesCS1B01G200600.1 | Wheat | extracellular | 31.03 | 29.58 |
| TraesCS1A01G180000.1 | Wheat | extracellular | 30.54 | 28.97 |
| PGSC0003DMT400071010 | Potato | extracellular | 27.59 | 28.57 |
| Os10t0508700-01 | Rice | extracellular | 30.05 | 28.5 |
| HORVU1Hr1G047710.1 | Barley | extracellular, mitochondrion, plasma membrane | 31.53 | 28.07 |
| EER91394 | Sorghum | extracellular, plasma membrane | 30.54 | 27.8 |
| EER91393 | Sorghum | extracellular | 31.53 | 26.78 |
| PGSC0003DMT400028039 | Potato | extracellular | 28.57 | 17.16 |
Protein Annotations
| Gene3D:1.20.140.40 | EntrezGene:102587590 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0004857 | GO:GO:0008150 |
| GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib | UniProt:M1AVJ8 | PFAM:PF04043 |
| EnsemblPlantsGene:PGSC0003DMG400012019 | PGSC:PGSC0003DMG400012019 | EnsemblPlants:PGSC0003DMT400031362 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF19 | InterPro:Pectinesterase_inhib_dom |
| SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM | TIGRFAMs:TIGR01614 | TMHMM:TMhelix | UniParc:UPI000294E950 |
| RefSeq:XP_006367638.1 | SEG:seg | : | : | : | : |
Description
DC1.2 homologue [Source:PGSC_GENE;Acc:PGSC0003DMG400012019]
Coordinates
chr3:-:39761197..39762042
Molecular Weight (calculated)
21999.6 Da
IEP (calculated)
6.109
GRAVY (calculated)
0.056
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGFCNNRCH FQIVYCLILI ALITCSFIES ARPAAGETNT EFIRTSCKST TYPNLCFSSL SSRSNAIGVS PQLLAHESLT VSLETAQSTS AMMLKLAYSQ
101: GMAPREVGAM RDCVEELSDA VSGIKKSLGE MKELRGKDFD LKMNDIQTWV SAALTDEDTC TEGFAGKVMN GKVKTVVREK ILEVAHMTSN ALALINSLAA
201: LHG
101: GMAPREVGAM RDCVEELSDA VSGIKKSLGE MKELRGKDFD LKMNDIQTWV SAALTDEDTC TEGFAGKVMN GKVKTVVREK ILEVAHMTSN ALALINSLAA
201: LHG
001: MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG
Arabidopsis Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA3]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.