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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • nucleus 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G180000.1 Wheat extracellular 60.25 67.29
TraesCS1D01G178200.1 Wheat extracellular 60.25 66.98
EER91394 Sorghum extracellular, plasma membrane 62.34 66.82
TraesCS1B01G200600.1 Wheat extracellular 58.58 65.73
HORVU1Hr1G047710.1 Barley extracellular, mitochondrion, plasma membrane 59.0 61.84
Os10t0508700-01 Rice extracellular 55.23 61.68
GSMUA_Achr5P19900_001 Banana endoplasmic reticulum, vacuole 34.73 39.71
VIT_16s0022g00890.t01 Wine grape plastid 24.27 37.18
GSMUA_Achr1P04190_001 Banana extracellular 31.38 36.76
VIT_00s0323g00070.t01 Wine grape endoplasmic reticulum, extracellular 30.54 35.78
VIT_16s0022g00860.t01 Wine grape extracellular 28.87 34.33
VIT_16s0022g00830.t01 Wine grape endoplasmic reticulum, extracellular 28.87 34.16
VIT_16s0022g00840.t01 Wine grape endoplasmic reticulum, extracellular 28.87 34.16
EES11737 Sorghum extracellular 30.54 34.11
KRH39988 Soybean endoplasmic reticulum, extracellular 28.45 32.85
CDY00279 Canola endoplasmic reticulum, extracellular 27.2 32.83
Bra010076.1-P Field mustard endoplasmic reticulum, extracellular 27.2 32.83
KXG20844 Sorghum extracellular 27.62 32.67
KRH23798 Soybean plastid 27.62 32.67
CDX87244 Canola plastid 27.2 32.66
AT5G62360.1 Thale cress endoplasmic reticulum, extracellular, plastid 27.62 32.51
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 27.2 32.5
PGSC0003DMT400072092 Potato endoplasmic reticulum, extracellular, vacuole 26.78 32.32
Bra035897.1-P Field mustard plastid 26.78 32.16
CDY16779 Canola plastid 26.78 32.16
Solyc03g083770.1.1 Tomato nucleus 26.78 32.0
VIT_00s0323g00060.t01 Wine grape endoplasmic reticulum, vacuole 26.78 31.84
KXG20845 Sorghum extracellular 28.87 31.8
PGSC0003DMT400031362 Potato extracellular 26.78 31.53
Solyc03g083660.1.1 Tomato endoplasmic reticulum, extracellular 25.52 31.44
CDY46918 Canola endoplasmic reticulum, extracellular 26.78 31.37
Bra027020.1-P Field mustard endoplasmic reticulum, extracellular 26.78 31.37
Solyc03g083710.1.1 Tomato nucleus 25.52 31.28
PGSC0003DMT400031359 Potato endoplasmic reticulum, extracellular 25.1 31.09
VIT_16s0022g00870.t01 Wine grape endoplasmic reticulum, extracellular 25.94 31.0
CDY31839 Canola endoplasmic reticulum, extracellular 26.36 30.88
Solyc03g083730.1.1 Tomato nucleus 25.94 30.85
Solyc03g083720.1.1 Tomato endoplasmic reticulum, plastid 26.78 30.62
PGSC0003DMT400031363 Potato plastid 25.52 30.35
PGSC0003DMT400028042 Potato endoplasmic reticulum, extracellular 26.36 30.14
CDX92686 Canola cytosol, nucleus, plastid 10.46 28.74
EES08718 Sorghum endoplasmic reticulum, plasma membrane, plastid 27.62 28.57
VIT_16s0022g00940.t01 Wine grape plastid 25.1 28.44
PGSC0003DMT400028038 Potato endoplasmic reticulum, extracellular 22.59 27.98
PGSC0003DMT400071010 Potato extracellular 21.76 26.53
Solyc11g019910.1.1 Tomato extracellular 21.76 26.53
Bra028261.1-P Field mustard cytosol, plastid 18.41 26.04
EER94449 Sorghum plastid 23.85 26.03
KRH39989 Soybean mitochondrion 22.59 25.71
CDY11065 Canola extracellular 21.34 25.63
Bra019180.1-P Field mustard extracellular 20.92 25.13
OQU92294 Sorghum extracellular, plastid 23.43 24.78
Solyc03g083700.1.1 Tomato endoplasmic reticulum, extracellular 19.25 24.21
CDY68609 Canola extracellular 20.5 24.02
CDY00484 Canola extracellular 20.5 24.02
Bra013878.1-P Field mustard plastid 15.06 24.0
CDX94465 Canola extracellular 19.67 23.62
CDX89432 Canola extracellular 19.67 23.62
CDX89431 Canola extracellular 19.25 23.12
AT5G51520.1 Thale cress extracellular 19.67 23.04
KRH23797 Soybean plastid 20.5 22.9
Bra013879.1-P Field mustard plastid 14.23 22.67
AT4G25250.1 Thale cress extracellular 18.41 22.11
CDY70934 Canola extracellular 18.41 21.57
CDX91588 Canola extracellular 18.83 21.53
KRH56360 Soybean extracellular 20.5 21.3
CDX94464 Canola extracellular 17.15 21.03
CDY11064 Canola extracellular 20.92 20.66
CDX89430 Canola extracellular 16.74 20.51
KRH62604 Soybean endoplasmic reticulum, extracellular 18.83 19.74
AT1G62760.1 Thale cress plastid 24.27 18.59
PGSC0003DMT400028039 Potato extracellular 23.01 16.27
Protein Annotations
Gene3D:1.20.140.40MapMan:35.1EntrezGene:8065868UniProt:C5WWB0EnsemblPlants:EER91393ProteinID:EER91393
ProteinID:EER91393.1GO:GO:0003674GO:GO:0004857GO:GO:0008150GO:GO:0030234GO:GO:0043086
InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043PFscan:PS51257PANTHER:PTHR31080PANTHER:PTHR31080:SF13
InterPro:Pectinesterase_inhib_domSMART:SM00856EnsemblPlantsGene:SORBI_3001G198700SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614
UniParc:UPI0001A82419RefSeq:XP_002464395.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr1:+:17941461..17942928
Molecular Weight (calculated)
24294.9 Da
IEP (calculated)
4.867
GRAVY (calculated)
0.121
Length
239 amino acids
Sequence
(BLAST)
001: MALARTASSS LLLLLVLSCW CGATTARPAP TSDAAGTGAG AGAGFVKSWC AGTEYPALCD ATLASYAAEV GTSAARLSWA ALTVTLDGAR DATAAMKGMA
101: AAGHLAPVAA EAARDCVSML GDAVDMLRQS VETMARLGEE EEEKQQGQPG SSSRRNVRFQ VDSVQTWASA ALTDDDMCME GFKGEAAVVR EAVRGHVVGV
201: AHLTADALAI VNAMGKSMGV DICRGSCKST PTPPPATAP
Best Arabidopsis Sequence Match ( AT5G62360.1 )
(BLAST)
001: MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG
Arabidopsis Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA3]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.