Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86901 | Canola | endoplasmic reticulum, extracellular, plastid | 84.73 | 86.0 |
| CDX87244 | Canola | plastid | 81.77 | 83.42 |
| CDY00279 | Canola | endoplasmic reticulum, extracellular | 81.28 | 83.33 |
| Bra010076.1-P | Field mustard | endoplasmic reticulum, extracellular | 80.79 | 82.83 |
| CDY16779 | Canola | plastid | 79.8 | 81.41 |
| Bra035897.1-P | Field mustard | plastid | 79.8 | 81.41 |
| Solyc03g083770.1.1 | Tomato | nucleus | 53.2 | 54.0 |
| VIT_16s0022g00870.t01 | Wine grape | endoplasmic reticulum, extracellular | 52.71 | 53.5 |
| Solyc03g083730.1.1 | Tomato | nucleus | 51.72 | 52.24 |
| PGSC0003DMT400072092 | Potato | endoplasmic reticulum, extracellular, vacuole | 50.74 | 52.02 |
| PGSC0003DMT400031363 | Potato | plastid | 51.23 | 51.74 |
| VIT_16s0022g00840.t01 | Wine grape | endoplasmic reticulum, extracellular | 51.23 | 51.49 |
| VIT_16s0022g00830.t01 | Wine grape | endoplasmic reticulum, extracellular | 51.23 | 51.49 |
| VIT_16s0022g00860.t01 | Wine grape | extracellular | 50.25 | 50.75 |
| KRH39988 | Soybean | endoplasmic reticulum, extracellular | 50.25 | 49.28 |
| PGSC0003DMT400031362 | Potato | extracellular | 48.28 | 48.28 |
| PGSC0003DMT400031359 | Potato | endoplasmic reticulum, extracellular | 45.81 | 48.19 |
| KRH23798 | Soybean | plastid | 47.29 | 47.52 |
| AT3G47380.1 | Thale cress | extracellular | 40.39 | 40.59 |
| AT5G62350.1 | Thale cress | extracellular | 40.39 | 40.59 |
| GSMUA_Achr5P19900_001 | Banana | endoplasmic reticulum, vacuole | 40.39 | 39.23 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 37.44 | 37.81 |
| GSMUA_Achr1P04190_001 | Banana | extracellular | 37.44 | 37.25 |
| GSMUA_Achr4P24680_001 | Banana | endoplasmic reticulum, mitochondrion, plastid, vacuole | 37.93 | 35.48 |
| AT4G12390.1 | Thale cress | endoplasmic reticulum, plasma membrane | 35.96 | 35.44 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 34.98 | 34.8 |
| AT4G25250.1 | Thale cress | extracellular | 31.03 | 31.66 |
| TraesCS1D01G178200.1 | Wheat | extracellular | 33.0 | 31.16 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 33.99 | 31.08 |
| TraesCS1B01G200600.1 | Wheat | extracellular | 32.51 | 30.99 |
| AT5G51520.1 | Thale cress | extracellular | 30.54 | 30.39 |
| TraesCS1A01G180000.1 | Wheat | extracellular | 32.02 | 30.37 |
| EER91394 | Sorghum | extracellular, plasma membrane | 33.0 | 30.04 |
| Zm00001d032495_P001 | Maize | extracellular | 32.02 | 29.68 |
| Os10t0508700-01 | Rice | extracellular | 31.03 | 29.44 |
| AT1G23205.1 | Thale cress | endoplasmic reticulum, vacuole | 29.06 | 28.78 |
| AT1G14890.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 31.03 | 28.77 |
| HORVU1Hr1G047710.1 | Barley | extracellular, mitochondrion, plasma membrane | 32.02 | 28.51 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 29.06 | 28.23 |
| AT1G70720.2 | Thale cress | plastid | 29.06 | 27.83 |
| EER91393 | Sorghum | extracellular | 32.51 | 27.62 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 31.03 | 26.36 |
| AT3G62820.1 | Thale cress | extracellular | 25.12 | 26.29 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 25.62 | 25.0 |
| AT1G62760.1 | Thale cress | plastid | 38.42 | 25.0 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:836357 | ProteinID:AED97600.1 | ArrayExpress:AT5G62360 | EnsemblPlantsGene:AT5G62360 |
| RefSeq:AT5G62360 | TAIR:AT5G62360 | RefSeq:AT5G62360-TAIR-G | EnsemblPlants:AT5G62360.1 | TAIR:AT5G62360.1 | ProteinID:BAA97200.1 |
| EMBL:BT003954 | GO:GO:0003674 | GO:GO:0004857 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009827 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib |
| RefSeq:NP_201042.2 | PFAM:PF04043 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF19 | InterPro:Pectinesterase_inhib_dom | UniProt:Q9LVA3 |
| SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM | TIGRFAMs:TIGR01614 | UniParc:UPI000000C200 | SEG:seg |
Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA3]
Coordinates
chr5:+:25040540..25041504
Molecular Weight (calculated)
22337.0 Da
IEP (calculated)
7.266
GRAVY (calculated)
0.130
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.