Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- plastid 1
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019180.1-P | Field mustard | extracellular | 76.88 | 76.88 |
| CDY11065 | Canola | extracellular | 76.38 | 76.38 |
| CDX89432 | Canola | extracellular | 76.38 | 76.38 |
| Bra013879.1-P | Field mustard | plastid | 57.29 | 76.0 |
| CDX89431 | Canola | extracellular | 75.88 | 75.88 |
| CDX94465 | Canola | extracellular | 75.88 | 75.88 |
| Bra013878.1-P | Field mustard | plastid | 55.78 | 74.0 |
| CDX92686 | Canola | cytosol, nucleus, plastid | 32.16 | 73.56 |
| CDY11064 | Canola | extracellular | 76.88 | 63.22 |
| AT5G51520.1 | Thale cress | extracellular | 63.82 | 62.25 |
| CDX94464 | Canola | extracellular | 60.3 | 61.54 |
| CDX89430 | Canola | extracellular | 58.29 | 59.49 |
| VIT_16s0022g00940.t01 | Wine grape | plastid | 40.7 | 38.39 |
| PGSC0003DMT400028038 | Potato | endoplasmic reticulum, extracellular | 36.18 | 37.31 |
| Solyc11g019910.1.1 | Tomato | extracellular | 34.67 | 35.2 |
| Solyc03g083660.1.1 | Tomato | endoplasmic reticulum, extracellular | 34.17 | 35.05 |
| PGSC0003DMT400071010 | Potato | extracellular | 33.67 | 34.18 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 32.16 | 31.84 |
| Solyc03g083710.1.1 | Tomato | nucleus | 30.65 | 31.28 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 31.66 | 31.03 |
| KRH23797 | Soybean | plastid | 33.17 | 30.84 |
| AT3G47380.1 | Thale cress | extracellular | 31.16 | 30.69 |
| AT5G62350.1 | Thale cress | extracellular | 30.65 | 30.2 |
| Solyc03g083700.1.1 | Tomato | endoplasmic reticulum, extracellular | 28.64 | 30.0 |
| KRH39989 | Soybean | mitochondrion | 30.15 | 28.57 |
| KRH56360 | Soybean | extracellular | 32.66 | 28.26 |
| KRH62604 | Soybean | endoplasmic reticulum, extracellular | 32.16 | 28.07 |
| GSMUA_Achr5P19900_001 | Banana | endoplasmic reticulum, vacuole | 28.64 | 27.27 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 27.64 | 26.96 |
| GSMUA_Achr1P04190_001 | Banana | extracellular | 27.64 | 26.96 |
| AT1G23205.1 | Thale cress | endoplasmic reticulum, vacuole | 26.63 | 25.85 |
| AT4G12390.1 | Thale cress | endoplasmic reticulum, plasma membrane | 26.63 | 25.73 |
| AT1G70720.2 | Thale cress | plastid | 26.63 | 25.0 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 25.63 | 24.4 |
| AT3G62820.1 | Thale cress | extracellular | 23.62 | 24.23 |
| GSMUA_Achr4P24680_001 | Banana | endoplasmic reticulum, mitochondrion, plastid, vacuole | 26.13 | 23.96 |
| AT1G14890.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 26.13 | 23.74 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 24.62 | 23.56 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 26.13 | 23.42 |
| Os10t0508700-01 | Rice | extracellular | 24.62 | 22.9 |
| TraesCS1A01G180000.1 | Wheat | extracellular | 24.62 | 22.9 |
| TraesCS1D01G178200.1 | Wheat | extracellular | 24.12 | 22.33 |
| AT1G62760.1 | Thale cress | plastid | 34.17 | 21.79 |
| TraesCS1B01G200600.1 | Wheat | extracellular | 23.12 | 21.6 |
| HORVU1Hr1G047710.1 | Barley | extracellular, mitochondrion, plasma membrane | 24.62 | 21.49 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 25.13 | 20.92 |
| PGSC0003DMT400028039 | Potato | extracellular | 33.67 | 19.82 |
| Zm00001d032495_P001 | Maize | extracellular | 21.11 | 19.18 |
| EER91393 | Sorghum | extracellular | 22.11 | 18.41 |
| EER91394 | Sorghum | extracellular, plasma membrane | 20.1 | 17.94 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:828628 | UniProt:A0A178V195 | ProteinID:AEE85031.1 | EMBL:AK227550 |
| ArrayExpress:AT4G25250 | EnsemblPlantsGene:AT4G25250 | RefSeq:AT4G25250 | TAIR:AT4G25250 | RefSeq:AT4G25250-TAIR-G | EnsemblPlants:AT4G25250.1 |
| TAIR:AT4G25250.1 | EMBL:AY085416 | EMBL:BT004588 | ProteinID:CAA23066.1 | ProteinID:CAB81336.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0004857 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009505 | GO:GO:0030234 | GO:GO:0030312 | GO:GO:0043086 |
| GO:GO:0046910 | GO:GO:0048046 | GO:GO:2000280 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib | RefSeq:NP_194255.1 |
| ProteinID:OAP00120.1 | PFAM:PF04043 | PO:PO:0009005 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF15 | InterPro:Pectinesterase_inhib_dom |
| UniProt:Q9SB38 | SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM | TIGRFAMs:TIGR01614 | UniParc:UPI000000C3C9 |
Description
PMEI4Pectinesterase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB38]
Coordinates
chr4:+:12934562..12935470
Molecular Weight (calculated)
21898.3 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.274
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRFVVLSLT LMVFINSSNF PKTAATPPGT YQNHTTYVKT ACNSTTYPTM CYNCLSSYSS TIKSDPIKLC TTSLNLNVKS AKNATLVVSN LLQKAKAAKS
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.