Factsheet for PGSC0003DMT400071010

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 4
plasma membrane 4
extracellular 5
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g019910.1.1	Tomato	extracellular	95.41	95.41
PGSC0003DMT400028038	Potato	endoplasmic reticulum, extracellular	59.69	60.62
CDX92686	Canola	cytosol, nucleus, plastid	15.82	35.63
VIT_16s0022g00940.t01	Wine grape	plastid	38.27	35.55
Bra013879.1-P	Field mustard	plastid	27.04	35.33
Bra019180.1-P	Field mustard	extracellular	35.2	34.67
CDY11065	Canola	extracellular	35.2	34.67
Bra013878.1-P	Field mustard	plastid	26.53	34.67
Bra028261.1-P	Field mustard	cytosol, plastid	29.08	33.73
AT4G25250.1	Thale cress	extracellular	34.18	33.67
CDX89432	Canola	extracellular	33.67	33.17
CDX94465	Canola	extracellular	33.67	33.17
CDX89431	Canola	extracellular	33.67	33.17
PGSC0003DMT400028031	Potato	extracellular	33.16	33.16
KRH62604	Soybean	endoplasmic reticulum, extracellular	36.73	31.58
KRH56360	Soybean	extracellular	35.71	30.43
AT5G51520.1	Thale cress	extracellular	31.63	30.39
CDY00484	Canola	extracellular	31.63	30.39
CDY68609	Canola	extracellular	31.63	30.39
PGSC0003DMT400072092	Potato	endoplasmic reticulum, extracellular, vacuole	30.61	30.3
CDX91588	Canola	extracellular	32.14	30.14
CDY70934	Canola	extracellular	31.12	29.9
PGSC0003DMT400007510	Potato	extracellular	29.59	29.9
PGSC0003DMT400055550	Potato	extracellular	29.08	29.69
PGSC0003DMT400031363	Potato	plastid	30.1	29.35
PGSC0003DMT400028039	Potato	extracellular	50.51	29.29
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	31.12	29.19
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	31.12	29.19
KRH39989	Soybean	mitochondrion	31.12	29.05
PGSC0003DMT400012073	Potato	plastid	27.04	28.96
CDY11064	Canola	extracellular	35.71	28.93
CDX89430	Canola	extracellular	28.57	28.72
PGSC0003DMT400049198	Potato	extracellular	30.61	28.57
PGSC0003DMT400035274	Potato	extracellular	27.04	28.04
KRH23797	Soybean	plastid	30.61	28.04
GSMUA_Achr1P04190_001	Banana	extracellular	29.08	27.94
CDX94464	Canola	extracellular	27.55	27.69
PGSC0003DMT400031362	Potato	extracellular	28.57	27.59
PGSC0003DMT400031359	Potato	endoplasmic reticulum, extracellular	27.04	27.46
PGSC0003DMT400067636	Potato	cytosol	23.47	26.29
Zm00001d032495_P001	Maize	extracellular	28.06	25.11
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	27.55	24.88
Os10t0508700-01	Rice	extracellular	26.02	23.83
TraesCS1A01G180000.1	Wheat	extracellular	26.02	23.83
TraesCS1D01G178200.1	Wheat	extracellular	25.51	23.26
EER91394	Sorghum	extracellular, plasma membrane	26.02	22.87
PGSC0003DMT400032573	Potato	cytosol	12.76	22.73
TraesCS1B01G200600.1	Wheat	extracellular	24.49	22.54
PGSC0003DMT400066783	Potato	extracellular	23.47	22.33
EER91393	Sorghum	extracellular	26.53	21.76
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	25.0	21.49
PGSC0003DMT400003231	Potato	mitochondrion	16.84	20.5

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:102597597	MapMan:35.1	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	UniProt:M1CN27	PFAM:PF04043
EnsemblPlantsGene:PGSC0003DMG400027617	PGSC:PGSC0003DMG400027617	EnsemblPlants:PGSC0003DMT400071010	PANTHER:PTHR31080	PANTHER:PTHR31080:SF15	InterPro:Pectinesterase_inhib_dom
SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGRFAMs:TIGR01614	UniParc:UPI000294A513	RefSeq:XP_006361367.1
SEG:seg	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027617]

Coordinates

chr11:-:12483794..12484488

Molecular Weight (calculated)

21469.7 Da

IEP (calculated)

7.780

GRAVY (calculated)

-0.163

Length

196 amino acids

Sequence
(BLAST)

001: MENCSPYNSK KLTKTLLPIL LLLLLSTISQ AQGNTNSNYI KSKCNITTYP SLCLKTLLPY ASYVQTNPIK LCDTALDIAI DSAKNTSHMV SELGKNKGIT
101: KYEAAAIKDC IGDLKDAVYE LKETLGAMNH LNDTDKDFQW DNAKTYASAV ISDANSCLDG FSDRKVNPDV KAKISDAISY VTKLASNALA FINHLF

Best Arabidopsis Sequence Match ( AT4G25250.1 )
(BLAST)

001: MLRFVVLSLT LMVFINSSNF PKTAATPPGT YQNHTTYVKT ACNSTTYPTM CYNCLSSYSS TIKSDPIKLC TTSLNLNVKS AKNATLVVSN LLQKAKAAKS
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY

Arabidopsis Description

PMEI4Pectinesterase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.