Factsheet for VIT_16s0022g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g00890.t01	Wine grape	plastid	33.65	45.51
Bra028261.1-P	Field mustard	cytosol, plastid	36.02	44.97
CDX92686	Canola	cytosol, nucleus, plastid	18.48	44.83
Bra013879.1-P	Field mustard	plastid	30.33	42.67
VIT_00s0323g00070.t01	Wine grape	endoplasmic reticulum, extracellular	40.76	42.16
Bra013878.1-P	Field mustard	plastid	29.86	42.0
VIT_00s0323g00060.t01	Wine grape	endoplasmic reticulum, vacuole	39.81	41.79
PGSC0003DMT400028038	Potato	endoplasmic reticulum, extracellular	37.91	41.45
Solyc03g083660.1.1	Tomato	endoplasmic reticulum, extracellular	37.91	41.24
Bra019180.1-P	Field mustard	extracellular	38.86	41.21
CDY11065	Canola	extracellular	38.86	41.21
AT4G25250.1	Thale cress	extracellular	38.39	40.7
VIT_16s0022g00860.t01	Wine grape	extracellular	38.39	40.3
CDY00484	Canola	extracellular	38.86	40.2
CDY68609	Canola	extracellular	38.86	40.2
CDY70934	Canola	extracellular	38.86	40.2
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	38.39	40.1
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	38.39	40.1
VIT_16s0022g00960.t01	Wine grape	extracellular, vacuole	37.44	39.9
AT5G51520.1	Thale cress	extracellular	38.39	39.71
KRH39989	Soybean	mitochondrion	39.34	39.52
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	37.44	39.5
CDX94465	Canola	extracellular	36.97	39.2
CDX89432	Canola	extracellular	36.97	39.2
CDX89431	Canola	extracellular	36.97	39.2
KRH23797	Soybean	plastid	39.34	38.78
CDX91588	Canola	extracellular	38.39	38.76
PGSC0003DMT400071010	Potato	extracellular	35.55	38.27
VIT_00s0323g00050.t01	Wine grape	extracellular	36.02	38.19
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	37.44	37.8
Solyc11g019910.1.1	Tomato	extracellular	35.07	37.76
KRH62604	Soybean	endoplasmic reticulum, extracellular	40.28	37.28
GSMUA_Achr1P04190_001	Banana	extracellular	36.02	37.25
Solyc03g083710.1.1	Tomato	nucleus	34.12	36.92
KRH56360	Soybean	extracellular	39.81	36.52
VIT_01s0011g05410.t01	Wine grape	extracellular	34.6	35.27
VIT_11s0016g00590.t01	Wine grape	extracellular	31.28	35.11
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	36.02	35.02
CDY11064	Canola	extracellular	39.81	34.71
CDX94464	Canola	extracellular	31.28	33.85
CDX89430	Canola	extracellular	30.81	33.33
VIT_07s0005g00480.t01	Wine grape	extracellular	30.81	33.16
VIT_01s0011g05390.t01	Wine grape	extracellular	33.65	32.87
Solyc03g083700.1.1	Tomato	endoplasmic reticulum, extracellular	27.96	31.05
TraesCS1D01G178200.1	Wheat	extracellular	27.01	26.51
Zm00001d032495_P001	Maize	extracellular	27.49	26.48
TraesCS1A01G180000.1	Wheat	extracellular	26.54	26.17
EER91394	Sorghum	extracellular, plasma membrane	27.49	26.01
Os10t0508700-01	Rice	extracellular	26.07	25.7
TraesCS1B01G200600.1	Wheat	extracellular	25.59	25.35
EER91393	Sorghum	extracellular	28.44	25.1
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	25.59	23.68
PGSC0003DMT400028039	Potato	extracellular	33.65	21.01

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:100265520	wikigene:100265520	MapMan:35.1	EMBL:AM470057	ProteinID:CAN79278
ProteinID:CAN79278.1	ProteinID:CCB49312	ProteinID:CCB49312.1	UniProt:F6HAT8	EMBL:FN595506	GO:GO:0003674
GO:GO:0004857	GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib
EntrezGene:LOC100265520	wikigene:LOC100265520	PFAM:PF04043	PANTHER:PTHR31080	PANTHER:PTHR31080:SF15	InterPro:Pectinesterase_inhib_dom
SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGRFAMs:TIGR01614	TMHMM:TMhelix	UniParc:UPI0001985DEE
ArrayExpress:VIT_16s0022g00940	EnsemblPlantsGene:VIT_16s0022g00940	EnsemblPlants:VIT_16s0022g00940.t01	unigene:Vvi.17193	RefSeq:XP_002263511	RefSeq:XP_002263511.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr16:+:12508848..12510055

Molecular Weight (calculated)

22872.5 Da

IEP (calculated)

8.802

GRAVY (calculated)

0.068

Length

211 amino acids

Sequence
(BLAST)

001: MEACILRNPS AFHVLSSLFF TLLLFNSITL TSSANTSTIS LTISKQFIKT SCNSTTYPGV CYKSLSSYAS KVQTSPLKLA NVALTVSLKA ARNASSTITL
101: LLERKGMTRM ETSIVKDCVE NFGDCIDELQ QSLQEFKSLG GGKNVAFQMA NIKTWVSAAL TDEYTCSDGF EGQKVSSSLQ QQIKNYISNV AKITSNALAL
201: INNLSVTDIK S

Best Arabidopsis Sequence Match ( AT5G51520.1 )
(BLAST)

001: MSQVLYSLTI VFVFFASTNI QKTSGSASSY SQNHKTFVKT ACNSTTYPDK CYKSLSSYSS NIKSDPIKLC TTALNLNVKS AKEATSVVSK LLKMSQKSTA
101: GRKGKMLPEA LILKDCLEEM KDTIIELKQA ITEMKNLQDG GSMAEHITNV RTWVSSALTD EGTCTDGFEE VKVNKETKKK VNKVVEELAT TTSNTLALIT
201: NLRY

Arabidopsis Description

Invertase [Source:UniProtKB/TrEMBL;Acc:Q9FHN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.