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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400028038 Potato endoplasmic reticulum, extracellular 86.08 86.53
Solyc03g083710.1.1 Tomato nucleus 64.95 64.62
Solyc11g019910.1.1 Tomato extracellular 56.19 55.61
Solyc03g083700.1.1 Tomato endoplasmic reticulum, extracellular 47.94 48.95
CDX92686 Canola cytosol, nucleus, plastid 18.04 40.23
VIT_16s0022g00940.t01 Wine grape plastid 41.24 37.91
Bra013878.1-P Field mustard plastid 28.87 37.33
Bra013879.1-P Field mustard plastid 28.87 37.33
Bra028261.1-P Field mustard cytosol, plastid 31.96 36.69
Bra019180.1-P Field mustard extracellular 37.11 36.18
CDY11065 Canola extracellular 37.11 36.18
AT5G51520.1 Thale cress extracellular 36.6 34.8
KRH39989 Soybean mitochondrion 37.11 34.29
CDX89431 Canola extracellular 35.05 34.17
AT4G25250.1 Thale cress extracellular 35.05 34.17
CDX94465 Canola extracellular 34.54 33.67
CDX89432 Canola extracellular 34.54 33.67
CDX91588 Canola extracellular 35.57 33.01
CDY00484 Canola extracellular 34.54 32.84
CDY68609 Canola extracellular 34.54 32.84
CDY70934 Canola extracellular 34.54 32.84
KRH23797 Soybean plastid 35.05 31.78
Solyc12g009270.1.1 Tomato nucleus 29.9 31.02
Solyc03g083730.1.1 Tomato nucleus 31.44 30.35
KRH62604 Soybean endoplasmic reticulum, extracellular 35.57 30.26
Solyc06g034370.1.1 Tomato extracellular 29.9 30.21
Solyc03g083770.1.1 Tomato nucleus 30.93 30.0
CDY11064 Canola extracellular 37.11 29.75
KRH56360 Soybean extracellular 35.05 29.57
GSMUA_Achr5P19900_001 Banana endoplasmic reticulum, vacuole 31.44 29.19
Solyc03g083720.1.1 Tomato endoplasmic reticulum, plastid 30.41 28.23
TraesCS1A01G180000.1 Wheat extracellular 30.93 28.04
GSMUA_Achr1P04190_001 Banana extracellular 29.38 27.94
TraesCS1D01G178200.1 Wheat extracellular 30.41 27.44
Zm00001d032495_P001 Maize extracellular 30.93 27.4
Solyc07g042390.1.1 Tomato nucleus 26.29 27.27
TraesCS1B01G200600.1 Wheat extracellular 29.9 27.23
CDX94464 Canola extracellular 27.32 27.18
EER91394 Sorghum extracellular, plasma membrane 30.93 26.91
CDX89430 Canola extracellular 26.8 26.67
HORVU1Hr1G047710.1 Barley extracellular, mitochondrion, plasma membrane 30.93 26.32
Solyc08g007450.1.1 Tomato extracellular 26.8 25.74
Os10t0508700-01 Rice extracellular 28.35 25.7
EER91393 Sorghum extracellular 31.44 25.52
Solyc01g091110.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 27.32 24.77
Solyc08g006690.1.1 Tomato nucleus 24.74 24.74
Solyc10g076730.1.1 Tomato extracellular 26.29 24.29
Solyc10g018320.1.1 Tomato extracellular 25.77 24.27
Solyc10g018330.1.1 Tomato endoplasmic reticulum, extracellular 27.84 24.22
GSMUA_Achr4P24680_001 Banana endoplasmic reticulum, mitochondrion, plastid, vacuole 26.8 23.96
Solyc01g091100.2.1 Tomato extracellular 23.71 22.33
Protein Annotations
EnsemblPlants:Solyc03g083660.1.1EnsemblPlantsGene:Solyc03g083660.1Gene3D:1.20.140.40GO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234GO:GO:0043086InterPro:IPR035513InterPro:Invertase/methylesterase_inhibInterPro:Pectinesterase_inhib_domPANTHER:PTHR31080
PANTHER:PTHR31080:SF15PFAM:PF04043SignalP:SignalP-noTMSMART:SM00856SUPFAM:SSF101148TIGRFAMs:TIGR01614
UniParc:UPI0002768CE7UniProt:K4BIE2MapMan:35.1:::
Description
No Description!
Coordinates
chr3:-:53608294..53608878
Molecular Weight (calculated)
21160.6 Da
IEP (calculated)
8.999
GRAVY (calculated)
-0.017
Length
194 amino acids
Sequence
(BLAST)
001: MEMSICKTLL FPLLTIALFI SLPQTSRAAT NEAYTNFVKT KCNVTTYISL CEKTLIPYAS SVKTNSTRLC KAALDVTIKA SKNASSTVST LRKQKGITRI
101: EASIIKDCIE DVKDAVYELK QAVEAMKHLG DKDKAFQLSN AKTYASAVIT DADSCTEGFS GREVNPTVKE MINSSMANIT KLASNALALI NHLY
Best Arabidopsis Sequence Match ( AT4G25250.1 )
(BLAST)
001: MLRFVVLSLT LMVFINSSNF PKTAATPPGT YQNHTTYVKT ACNSTTYPTM CYNCLSSYSS TIKSDPIKLC TTSLNLNVKS AKNATLVVSN LLQKAKAAKS
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY
Arabidopsis Description
PMEI4Pectinesterase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB38]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.