Factsheet for Solyc06g034370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 22364583
extracellular: 22892874

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055550	Potato	extracellular	91.15	91.15
VIT_16s0022g00960.t01	Wine grape	extracellular, vacuole	56.25	54.55
KRH62602	Soybean	nucleus	53.12	52.85
KRH56361	Soybean	plastid	52.6	51.01
Bra018157.1-P	Field mustard	plastid	47.92	49.73
AT5G62350.1	Thale cress	extracellular	52.08	49.51
CDX86904	Canola	extracellular	51.56	48.53
CDY70789	Canola	extracellular	50.52	48.02
Bra010075.1-P	Field mustard	extracellular	50.52	47.55
CDY00278	Canola	extracellular	50.52	47.55
CDX99059	Canola	extracellular	50.0	47.52
CDY30715	Canola	endoplasmic reticulum, extracellular	49.48	47.26
Bra029267.1-P	Field mustard	endoplasmic reticulum, extracellular	49.48	47.26
AT3G47380.1	Thale cress	extracellular	48.44	46.04
CDX89429	Canola	extracellular	47.4	45.27
CDY11066	Canola	extracellular	46.88	44.78
AT4G25260.1	Thale cress	endoplasmic reticulum, extracellular	46.88	44.78
CDX94463	Canola	extracellular	46.35	44.28
Bra019179.1-P	Field mustard	extracellular	46.35	44.28
Solyc08g007450.1.1	Tomato	extracellular	46.35	44.06
Bra013881.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	46.35	44.06
Solyc03g083770.1.1	Tomato	nucleus	45.83	44.0
CDX92687	Canola	extracellular	45.83	43.78
Solyc03g083730.1.1	Tomato	nucleus	43.23	41.29
GSMUA_Achr3P26730_001	Banana	extracellular	35.94	39.88
GSMUA_Achr11P...	Banana	extracellular	34.38	39.52
GSMUA_Achr8P12460_001	Banana	extracellular	34.9	39.41
GSMUA_Achr1P00870_001	Banana	extracellular	33.33	38.1
Os06t0711800-01	Rice	extracellular	39.58	38.0
TraesCS7B01G306500.1	Wheat	extracellular, golgi	40.1	37.75
TraesCS7D01G400200.1	Wheat	extracellular, golgi	40.1	37.75
KXG20844	Sorghum	extracellular	39.58	37.62
TraesCS7A01G406500.1	Wheat	extracellular, golgi	40.1	37.56
HORVU7Hr1G095080.4	Barley	mitochondrion, plastid	39.58	37.25
Solyc07g042390.1.1	Tomato	nucleus	35.42	36.36
Os04t0106000-01	Rice	extracellular	32.81	35.59
Solyc03g083720.1.1	Tomato	endoplasmic reticulum, plastid	38.54	35.41
KXG20845	Sorghum	extracellular	39.58	35.02
Zm00001d014757_P001	Maize	extracellular, vacuole	38.54	34.58
GSMUA_Achr5P12890_001	Banana	endoplasmic reticulum	31.77	33.52
Solyc01g091100.2.1	Tomato	extracellular	35.94	33.5
Zm00001d036431_P001	Maize	extracellular	38.54	33.48
Solyc10g018320.1.1	Tomato	extracellular	34.9	32.52
Solyc10g076730.1.1	Tomato	extracellular	35.42	32.38
Solyc12g009270.1.1	Tomato	nucleus	31.25	32.09
Solyc03g083710.1.1	Tomato	nucleus	32.29	31.79
Solyc01g091110.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	35.42	31.78
Zm00001d024913_P001	Maize	extracellular	32.29	30.54
Solyc10g018330.1.1	Tomato	endoplasmic reticulum, extracellular	35.42	30.49
EES11737	Sorghum	extracellular	33.85	30.37
Solyc03g083660.1.1	Tomato	endoplasmic reticulum, extracellular	30.21	29.9
Solyc11g019910.1.1	Tomato	extracellular	30.21	29.59
Solyc03g083700.1.1	Tomato	endoplasmic reticulum, extracellular	28.65	28.95
TraesCS2D01G035100.1	Wheat	extracellular	30.21	27.23
TraesCS2A01G036100.1	Wheat	extracellular	29.69	26.89
Solyc08g006690.1.1	Tomato	nucleus	26.56	26.29
TraesCS2B01G049000.1	Wheat	extracellular	28.65	25.82

Protein Annotations

Gene3D:1.20.140.40	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	UniProt:K4C4Q8	PFAM:PF04043
PANTHER:PTHR31080	PANTHER:PTHR31080:SF31	InterPro:Pectinesterase_inhib_dom	SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc06g034370.1	EnsemblPlants:Solyc06g034370.1.1	TIGRFAMs:TIGR01614	TMHMM:TMhelix	UniParc:UPI0002765B5B	SEG:seg

Description

No Description!

Coordinates

chr6:-:24179516..24180094

Molecular Weight (calculated)

21162.7 Da

IEP (calculated)

10.624

GRAVY (calculated)

-0.073

Length

192 amino acids

Sequence
(BLAST)

001: MAALKLILLA AFLFLFNFTA NSTALPTSFI KTSCKITTYP QVCVTSLSVY APTIKRSPQQ LAQTALSVSL DRAQSAHTFI TKLNKFKGLK SREYAALKDC
101: LEEMSETVDR INKSVKELTR MGSSRGKDVQ WHMSNIQTWM SAAITNENSC ADGFAGRALN GRIKSSIRAR VTHVTQVTSN ALALINQFPA KH

Best Arabidopsis Sequence Match ( AT5G62350.1 )
(BLAST)

001: MAKQYLFVLL SISYLLSLEL TAATAASQTG ASKKAINFIQ SSCKTTTYPA LCVHSLSVYA NDIQTSPKRL AETAIAVTLS RAQSTKLFVS RLTRMKGLKK
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.