Factsheet for Solyc11g019910.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 4
plasma membrane 4
extracellular 5
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071010	Potato	extracellular	95.41	95.41
Solyc03g083660.1.1	Tomato	endoplasmic reticulum, extracellular	55.61	56.19
Solyc03g083710.1.1	Tomato	nucleus	49.49	49.74
Solyc03g083700.1.1	Tomato	endoplasmic reticulum, extracellular	38.27	39.47
Bra013879.1-P	Field mustard	plastid	27.55	36.0
Bra013878.1-P	Field mustard	plastid	27.04	35.33
VIT_16s0022g00940.t01	Wine grape	plastid	37.76	35.07
AT4G25250.1	Thale cress	extracellular	35.2	34.67
CDY11065	Canola	extracellular	35.2	34.67
Bra019180.1-P	Field mustard	extracellular	35.2	34.67
CDX92686	Canola	cytosol, nucleus, plastid	15.31	34.48
Bra028261.1-P	Field mustard	cytosol, plastid	29.08	33.73
CDX94465	Canola	extracellular	34.18	33.67
CDX89432	Canola	extracellular	34.18	33.67
CDX89431	Canola	extracellular	34.18	33.67
KRH62604	Soybean	endoplasmic reticulum, extracellular	35.71	30.7
CDX91588	Canola	extracellular	32.65	30.62
Solyc03g083770.1.1	Tomato	nucleus	31.12	30.5
Solyc12g009270.1.1	Tomato	nucleus	29.08	30.48
CDY00484	Canola	extracellular	31.63	30.39
CDY68609	Canola	extracellular	31.63	30.39
CDY70934	Canola	extracellular	31.63	30.39
Solyc06g034370.1.1	Tomato	extracellular	29.59	30.21
AT5G51520.1	Thale cress	extracellular	31.12	29.9
Solyc03g083730.1.1	Tomato	nucleus	30.61	29.85
KRH56360	Soybean	extracellular	34.69	29.57
KRH39989	Soybean	mitochondrion	31.12	29.05
CDY11064	Canola	extracellular	35.71	28.93
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	30.61	28.71
Solyc03g083720.1.1	Tomato	endoplasmic reticulum, plastid	30.61	28.71
Solyc10g076730.1.1	Tomato	extracellular	30.61	28.57
CDX89430	Canola	extracellular	27.55	27.69
GSMUA_Achr1P04190_001	Banana	extracellular	28.57	27.45
CDX94464	Canola	extracellular	27.04	27.18
KRH23797	Soybean	plastid	29.59	27.1
Solyc07g042390.1.1	Tomato	nucleus	25.51	26.74
Solyc08g007450.1.1	Tomato	extracellular	26.02	25.25
Solyc08g006690.1.1	Tomato	nucleus	23.98	24.23
Zm00001d032495_P001	Maize	extracellular	27.04	24.2
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	26.53	23.96
Solyc01g091110.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	26.02	23.83
TraesCS1A01G180000.1	Wheat	extracellular	26.02	23.83
Os10t0508700-01	Rice	extracellular	26.02	23.83
TraesCS1D01G178200.1	Wheat	extracellular	25.51	23.26
TraesCS1B01G200600.1	Wheat	extracellular	24.49	22.54
Solyc10g018320.1.1	Tomato	extracellular	23.47	22.33
Solyc01g091100.2.1	Tomato	extracellular	22.96	21.84
EER91393	Sorghum	extracellular	26.53	21.76
EER91394	Sorghum	extracellular, plasma membrane	24.49	21.52
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	25.0	21.49
Solyc10g018330.1.1	Tomato	endoplasmic reticulum, extracellular	23.47	20.63

Protein Annotations

EnsemblPlants:Solyc11g019910.1.1	EnsemblPlantsGene:Solyc11g019910.1	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom	PANTHER:PTHR31080
PANTHER:PTHR31080:SF15	PFAM:PF04043	SEG:seg	SignalP:SignalP-noTM	SMART:SM00856	SUPFAM:SSF101148
TIGRFAMs:TIGR01614	TMHMM:TMhelix	UniParc:UPI000276AA88	UniProt:K4D6U4	MapMan:35.1	:

Description

No Description!

Coordinates

chr11:-:9754107..9754697

Molecular Weight (calculated)

21561.8 Da

IEP (calculated)

7.776

GRAVY (calculated)

-0.143

Length

196 amino acids

Sequence
(BLAST)

001: MENYSPYNSK KLTKTLLPIL LLLLVCTISQ AQGNINSNYI KSKCNITTYP SLCLNTLLPY ASYVQTNPIK LCDTALDIAI DSAKNTSHMV SELGKNKGIT
101: KYETAAIKDC ISDLKDAVYE LKETLGAMNH LNDTDKDFQW DNAKTYASAV ISDANSCLDG FSDRKVNPAV KAKISDAISY VTKLASNALA FINHLY

Best Arabidopsis Sequence Match ( AT4G25250.1 )
(BLAST)

001: MLRFVVLSLT LMVFINSSNF PKTAATPPGT YQNHTTYVKT ACNSTTYPTM CYNCLSSYSS TIKSDPIKLC TTSLNLNVKS AKNATLVVSN LLQKAKAAKS
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY

Arabidopsis Description

PMEI4Pectinesterase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.