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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11065 Canola extracellular 96.55 42.21
CDX94465 Canola extracellular 81.61 35.68
CDX89432 Canola extracellular 81.61 35.68
CDY11064 Canola extracellular 98.85 35.54
CDX89431 Canola extracellular 80.46 35.18
AT4G25250.1 Thale cress extracellular 73.56 32.16
CDY00484 Canola extracellular 64.37 27.45
CDY68609 Canola extracellular 63.22 26.96
CDY70934 Canola extracellular 62.07 26.47
CDX91588 Canola extracellular 63.22 26.32
CDX94464 Canola extracellular 56.32 25.13
CDX89430 Canola extracellular 54.02 24.1
PGSC0003DMT400028038 Potato endoplasmic reticulum, extracellular 41.38 18.65
VIT_16s0022g00940.t01 Wine grape plastid 44.83 18.48
CDX92687 Canola extracellular 42.53 18.41
CDY11066 Canola extracellular 42.53 18.41
CDY21423 Canola plastid 39.08 18.28
Solyc03g083660.1.1 Tomato endoplasmic reticulum, extracellular 40.23 18.04
CDX89429 Canola extracellular 41.38 17.91
CDX94463 Canola extracellular 41.38 17.91
CDX87244 Canola plastid 40.23 17.59
CDY16779 Canola plastid 39.08 17.09
CDY03725 Canola extracellular 39.08 16.92
CDY09473 Canola extracellular 39.08 16.83
KRH23797 Soybean plastid 41.38 16.82
CDY00279 Canola endoplasmic reticulum, extracellular 37.93 16.67
CDY16561 Canola extracellular 36.78 16.33
CDY72606 Canola endoplasmic reticulum, extracellular 39.08 16.11
CDX99059 Canola extracellular 36.78 15.84
CDY70789 Canola extracellular 36.78 15.84
PGSC0003DMT400071010 Potato extracellular 35.63 15.82
CDY31841 Canola endoplasmic reticulum, extracellular 36.78 15.76
CDY72130 Canola extracellular 36.78 15.76
CDY23485 Canola endoplasmic reticulum, extracellular 37.93 15.71
CDX68333 Canola extracellular 37.93 15.64
CDY65618 Canola extracellular 36.78 15.53
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 35.63 15.5
GSMUA_Achr5P19900_001 Banana endoplasmic reticulum, vacuole 36.78 15.31
Solyc11g019910.1.1 Tomato extracellular 34.48 15.31
CDY46921 Canola endoplasmic reticulum, extracellular 35.63 15.27
CDY31839 Canola endoplasmic reticulum, extracellular 35.63 15.2
CDY46918 Canola endoplasmic reticulum, extracellular 35.63 15.2
CDX86708 Canola endoplasmic reticulum, vacuole 35.63 15.2
CDY52309 Canola endoplasmic reticulum, vacuole 35.63 15.2
CDX70942 Canola extracellular 35.63 15.2
CDY25774 Canola endoplasmic reticulum, plastid 39.08 15.18
CDX97343 Canola endoplasmic reticulum, plasma membrane 35.63 15.05
CDY09429 Canola endoplasmic reticulum, vacuole 35.63 14.98
CDY48809 Canola endoplasmic reticulum, vacuole 35.63 14.98
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 34.48 14.93
CDY52024 Canola endoplasmic reticulum, extracellular 34.48 14.93
Solyc03g083710.1.1 Tomato nucleus 33.33 14.87
CDX92436 Canola extracellular 34.48 14.78
GSMUA_Achr1P04190_001 Banana extracellular 34.48 14.71
CDY04097 Canola endoplasmic reticulum, vacuole 34.48 14.71
CDY34685 Canola extracellular 34.48 14.56
CDX83212 Canola endoplasmic reticulum, extracellular 34.48 14.49
CDY21496 Canola endoplasmic reticulum, extracellular 34.48 14.49
CDY45298 Canola endoplasmic reticulum, extracellular 33.33 14.43
KRH39989 Soybean mitochondrion 34.48 14.29
CDY63067 Canola extracellular 34.48 14.22
CDX86904 Canola extracellular 33.33 14.22
CDY00278 Canola extracellular 33.33 14.22
CDY17457 Canola endoplasmic reticulum, vacuole 33.33 14.22
CDY30715 Canola endoplasmic reticulum, extracellular 32.18 13.93
CDX76665 Canola plastid 29.89 13.76
CDY11451 Canola extracellular, plastid 29.89 13.76
KRH62604 Soybean endoplasmic reticulum, extracellular 35.63 13.6
CDX80124 Canola extracellular, vacuole 32.18 13.59
CDY53010 Canola extracellular, plasma membrane 31.03 13.11
KRH56360 Soybean extracellular 34.48 13.04
CDY53526 Canola endoplasmic reticulum, extracellular 26.44 12.64
Solyc03g083700.1.1 Tomato endoplasmic reticulum, extracellular 26.44 12.11
GSMUA_Achr4P24680_001 Banana endoplasmic reticulum, mitochondrion, plastid, vacuole 28.74 11.52
Zm00001d032495_P001 Maize extracellular 28.74 11.42
Os10t0508700-01 Rice extracellular 26.44 10.75
EER91393 Sorghum extracellular 28.74 10.46
CDY36241 Canola endoplasmic reticulum, vacuole 25.29 10.38
CDY17658 Canola endoplasmic reticulum, vacuole 25.29 10.38
EER91394 Sorghum extracellular, plasma membrane 25.29 9.87
TraesCS1B01G200600.1 Wheat extracellular 24.14 9.86
TraesCS1A01G180000.1 Wheat extracellular 24.14 9.81
TraesCS1D01G178200.1 Wheat extracellular 24.14 9.77
HORVU1Hr1G047710.1 Barley extracellular, mitochondrion, plasma membrane 25.29 9.65
PGSC0003DMT400028039 Potato extracellular 36.78 9.47
Protein Annotations
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11Gene3D:1.20.140.40MapMan:35.2GO:A0A078DTT7EnsemblPlants:CDX92686
ProteinID:CDX92686ProteinID:CDX92686.1ncoils:CoilGO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00154499001InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043PANTHER:PTHR31080
PANTHER:PTHR31080:SF15MetaCyc:PWY-1081MetaCyc:PWY-7246MetaCyc:PWY-7248InterPro:Pectinesterase_inhib_domSUPFAM:SSF101148
TIGRFAMs:TIGR01614UniPathway:UPA00545UniParc:UPI0004EE5592SEG:seg::
Description
BnaC07g39440D
Coordinates
chrLK031873:+:325174..325437
Molecular Weight (calculated)
9863.6 Da
IEP (calculated)
4.477
GRAVY (calculated)
-0.715
Length
87 amino acids
Sequence
(BLAST)
1: MKDTVDELKQ AMAELKNLYG GGISKEEHLK NMKTWVSAAL TDDTTCTDEF EEEEVNEETK KKVEKAVSEL SKTTSNTLAL ITNYLRF
Best Arabidopsis Sequence Match ( AT4G25250.1 )
(BLAST)
001: MLRFVVLSLT LMVFINSSNF PKTAATPPGT YQNHTTYVKT ACNSTTYPTM CYNCLSSYSS TIKSDPIKLC TTSLNLNVKS AKNATLVVSN LLQKAKAAKS
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY
Arabidopsis Description
PMEI4Pectinesterase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB38]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.