Factsheet for PGSC0003DMT400028039

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g083710.1.1	Tomato	nucleus	48.52	84.1
PGSC0003DMT400028038	Potato	endoplasmic reticulum, extracellular	39.05	68.39
PGSC0003DMT400071010	Potato	extracellular	29.29	50.51
Bra013879.1-P	Field mustard	plastid	16.57	37.33
CDX92686	Canola	cytosol, nucleus, plastid	9.47	36.78
Bra013878.1-P	Field mustard	plastid	16.27	36.67
Bra019180.1-P	Field mustard	extracellular	21.3	36.18
CDY11065	Canola	extracellular	21.3	36.18
Bra028261.1-P	Field mustard	cytosol, plastid	17.46	34.91
PGSC0003DMT400028031	Potato	extracellular	19.82	34.18
CDX89431	Canola	extracellular	20.12	34.17
CDX89432	Canola	extracellular	19.82	33.67
AT4G25250.1	Thale cress	extracellular	19.82	33.67
CDX94465	Canola	extracellular	19.82	33.67
VIT_16s0022g00940.t01	Wine grape	plastid	21.01	33.65
AT5G51520.1	Thale cress	extracellular	20.12	33.33
CDY70934	Canola	extracellular	19.53	32.35
CDX91588	Canola	extracellular	19.82	32.06
PGSC0003DMT400055550	Potato	extracellular	17.46	30.73
KRH39989	Soybean	mitochondrion	18.93	30.48
PGSC0003DMT400007510	Potato	extracellular	17.46	30.41
CDY11064	Canola	extracellular	21.6	30.17
KRH23797	Soybean	plastid	18.93	29.91
CDY68609	Canola	extracellular	18.05	29.9
GSMUA_Achr1P04190_001	Banana	extracellular	18.05	29.9
CDY00484	Canola	extracellular	18.05	29.9
PGSC0003DMT400031363	Potato	plastid	17.75	29.85
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	18.05	29.19
KRH62604	Soybean	endoplasmic reticulum, extracellular	19.53	28.95
PGSC0003DMT400072092	Potato	endoplasmic reticulum, extracellular, vacuole	16.86	28.79
CDX89430	Canola	extracellular	16.57	28.72
KRH56360	Soybean	extracellular	19.53	28.7
PGSC0003DMT400031362	Potato	extracellular	17.16	28.57
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	17.46	28.23
CDX94464	Canola	extracellular	16.27	28.21
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	17.75	27.65
PGSC0003DMT400012073	Potato	plastid	14.79	27.32
Os10t0508700-01	Rice	extracellular	16.57	26.17
PGSC0003DMT400035274	Potato	extracellular	14.5	25.93
PGSC0003DMT400067636	Potato	cytosol	13.31	25.71
TraesCS1A01G180000.1	Wheat	extracellular	16.27	25.7
PGSC0003DMT400032573	Potato	cytosol	8.28	25.45
TraesCS1D01G178200.1	Wheat	extracellular	15.98	25.12
PGSC0003DMT400031359	Potato	endoplasmic reticulum, extracellular	14.2	24.87
Zm00001d032495_P001	Maize	extracellular	15.98	24.66
TraesCS1B01G200600.1	Wheat	extracellular	15.38	24.41
EER91394	Sorghum	extracellular, plasma membrane	15.98	24.22
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	16.27	24.12
EER91393	Sorghum	extracellular	16.27	23.01
PGSC0003DMT400049198	Potato	extracellular	13.91	22.38
PGSC0003DMT400003231	Potato	mitochondrion	10.06	21.12
PGSC0003DMT400066783	Potato	extracellular	12.13	19.9

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:102592643	EntrezGene:102592978	MapMan:35.1	GO:GO:0003674	GO:GO:0004857
GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	UniProt:M1AQK7
PFAM:PF04043	EnsemblPlantsGene:PGSC0003DMG400010814	PGSC:PGSC0003DMG400010814	EnsemblPlants:PGSC0003DMT400028039	PANTHER:PTHR31080	PANTHER:PTHR31080:SF15
InterPro:Pectinesterase_inhib_dom	SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGRFAMs:TIGR01614	TMHMM:TMhelix
UniParc:UPI0002962B91	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400010814]

Coordinates

chr3:+:40027846..40029836

Molecular Weight (calculated)

36322.7 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.074

Length

338 amino acids

Sequence
(BLAST)

001: MASSCKILIL LQLFSIVLFF SQTHLLVTAA KDSGQANTNF VKTKCKITTY PSLCLKTLIP YASSVKANST KLCKEALNVA TKGARDASTI VLNLKKQKGI
101: TRSEAAAIKD CIEDVKDAVY ELKRAVDAIG HLGDKDKAFQ LANAKTYASA AITDADSCTD GLTDQAAKES SRPAAYTNFI KTKCNITTNP SLCVKTLMPY
201: ASTVKTNPRI LCKEALKVAI KGARSASLIF WNLKKQDGIS QYEAGAIRDC VEAVKTAVHE LKQTVNTIGH LSGAEDKESQ LHNAISYASS ALTNAETCID
301: GFSESEEKVN PDVKKVIDKS ITVIKTLASN ALSLISDL

Best Arabidopsis Sequence Match ( AT4G25250.1 )
(BLAST)

001: MLRFVVLSLT LMVFINSSNF PKTAATPPGT YQNHTTYVKT ACNSTTYPTM CYNCLSSYSS TIKSDPIKLC TTSLNLNVKS AKNATLVVSN LLQKAKAAKS
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY

Arabidopsis Description

PMEI4Pectinesterase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.