Factsheet for PGSC0003DMT400031363

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
endoplasmic reticulum 3
plasma membrane 3
extracellular 2
vacuole 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g083730.1.1	Tomato	nucleus	91.54	91.54
PGSC0003DMT400031362	Potato	extracellular	88.56	87.68
PGSC0003DMT400072092	Potato	endoplasmic reticulum, extracellular, vacuole	81.59	82.83
PGSC0003DMT400031359	Potato	endoplasmic reticulum, extracellular	74.63	77.72
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	59.2	59.5
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	57.21	56.93
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	57.21	56.93
VIT_16s0022g00860.t01	Wine grape	extracellular	56.72	56.72
CDX87244	Canola	plastid	53.73	54.27
Bra035897.1-P	Field mustard	plastid	53.23	53.77
CDY16779	Canola	plastid	53.23	53.77
CDX86901	Canola	endoplasmic reticulum, extracellular, plastid	52.24	52.5
AT5G62360.1	Thale cress	endoplasmic reticulum, extracellular, plastid	51.74	51.23
Bra010076.1-P	Field mustard	endoplasmic reticulum, extracellular	50.25	51.01
CDY00279	Canola	endoplasmic reticulum, extracellular	50.25	51.01
KRH39988	Soybean	endoplasmic reticulum, extracellular	48.76	47.34
KRH23798	Soybean	plastid	47.26	47.03
PGSC0003DMT400028031	Potato	extracellular	44.78	45.92
PGSC0003DMT400012073	Potato	plastid	41.29	45.36
PGSC0003DMT400055550	Potato	extracellular	43.28	45.31
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	43.78	42.11
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	42.79	41.15
GSMUA_Achr1P04190_001	Banana	extracellular	40.3	39.71
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	42.29	39.17
PGSC0003DMT400035274	Potato	extracellular	34.83	37.04
PGSC0003DMT400007510	Potato	extracellular	34.33	35.57
PGSC0003DMT400003231	Potato	mitochondrion	27.36	34.16
PGSC0003DMT400032573	Potato	cytosol	18.41	33.64
PGSC0003DMT400067636	Potato	cytosol	28.86	33.14
PGSC0003DMT400049198	Potato	extracellular	34.33	32.86
PGSC0003DMT400066783	Potato	extracellular	33.33	32.52
PGSC0003DMT400028038	Potato	endoplasmic reticulum, extracellular	30.35	31.61
PGSC0003DMT400071010	Potato	extracellular	29.35	30.1
TraesCS1B01G200600.1	Wheat	extracellular	31.34	29.58
TraesCS1D01G178200.1	Wheat	extracellular	31.34	29.3
Zm00001d032495_P001	Maize	extracellular	31.34	28.77
TraesCS1A01G180000.1	Wheat	extracellular	30.35	28.5
Os10t0508700-01	Rice	extracellular	29.85	28.04
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	31.34	27.63
EER91394	Sorghum	extracellular, plasma membrane	29.85	26.91
EER91393	Sorghum	extracellular	30.35	25.52
PGSC0003DMT400028039	Potato	extracellular	29.85	17.75

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:102587273	EntrezGene:102591739	MapMan:35.1	GO:GO:0003674	GO:GO:0004857
GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	UniProt:M1AVJ9
PFAM:PF04043	EnsemblPlantsGene:PGSC0003DMG400012020	PGSC:PGSC0003DMG400012020	EnsemblPlants:PGSC0003DMT400031363	PANTHER:PTHR31080	PANTHER:PTHR31080:SF19
InterPro:Pectinesterase_inhib_dom	SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGRFAMs:TIGR01614	UniParc:UPI000296CAC1
RefSeq:XP_006362110.1	RefSeq:XP_006367637.1	SEG:seg	:	:	:

Description

Pectin methlyesterase inhibitor protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400012020]

Coordinates

chr3:-:39768604..39769328

Molecular Weight (calculated)

21611.8 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.047

Length

201 amino acids

Sequence
(BLAST)

001: MEGGYFLTYF LISIALITSS NNWNSVSAAR PSAGETNTEF IRTSCKSTTY PNLCFSSLSS RSNAIGVSPQ LLAHESLSVS LETAQSTSAM MIKLSHSQGM
101: TPREVGAMRD CVEELSDAVS GIKKSLGEMK ELRGKDFDLK MSDIQTWVSA ALTDEDTCTE GFAGKVMNGK VKTVVREKIL EVAHMTSNAL ALINSLAALH
201: G

Best Arabidopsis Sequence Match ( AT5G62360.1 )
(BLAST)

001: MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA3]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.