Factsheet for PGSC0003DMT400028038

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g083660.1.1	Tomato	endoplasmic reticulum, extracellular	86.53	86.08
PGSC0003DMT400071010	Potato	extracellular	60.62	59.69
CDX92686	Canola	cytosol, nucleus, plastid	18.65	41.38
PGSC0003DMT400028039	Potato	extracellular	68.39	39.05
Bra013879.1-P	Field mustard	plastid	29.53	38.0
VIT_16s0022g00940.t01	Wine grape	plastid	41.45	37.91
Bra019180.1-P	Field mustard	extracellular	38.86	37.69
CDY11065	Canola	extracellular	38.86	37.69
Bra013878.1-P	Field mustard	plastid	28.5	36.67
AT4G25250.1	Thale cress	extracellular	37.31	36.18
Bra028261.1-P	Field mustard	cytosol, plastid	31.61	36.09
CDX89431	Canola	extracellular	36.79	35.68
PGSC0003DMT400028031	Potato	extracellular	35.75	35.2
CDX89432	Canola	extracellular	36.27	35.18
CDX94465	Canola	extracellular	36.27	35.18
AT5G51520.1	Thale cress	extracellular	36.27	34.31
CDY70934	Canola	extracellular	35.23	33.33
CDX91588	Canola	extracellular	35.75	33.01
KRH23797	Soybean	plastid	36.27	32.71
KRH39989	Soybean	mitochondrion	35.23	32.38
CDY68609	Canola	extracellular	34.2	32.35
CDY00484	Canola	extracellular	34.2	32.35
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	34.2	31.58
CDY11064	Canola	extracellular	39.38	31.41
KRH62604	Soybean	endoplasmic reticulum, extracellular	36.79	31.14
PGSC0003DMT400031363	Potato	plastid	31.61	30.35
PGSC0003DMT400012073	Potato	plastid	28.5	30.05
KRH56360	Soybean	extracellular	35.75	30.0
PGSC0003DMT400007510	Potato	extracellular	30.05	29.9
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	32.12	29.67
PGSC0003DMT400072092	Potato	endoplasmic reticulum, extracellular, vacuole	30.05	29.29
PGSC0003DMT400055550	Potato	extracellular	29.02	29.17
GSMUA_Achr1P04190_001	Banana	extracellular	30.57	28.92
CDX94464	Canola	extracellular	29.02	28.72
PGSC0003DMT400031362	Potato	extracellular	30.05	28.57
CDX89430	Canola	extracellular	28.5	28.21
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	30.57	27.19
PGSC0003DMT400035274	Potato	extracellular	24.87	25.4
TraesCS1A01G180000.1	Wheat	extracellular	27.98	25.23
PGSC0003DMT400067636	Potato	cytosol	22.8	25.14
Zm00001d032495_P001	Maize	extracellular	28.5	25.11
PGSC0003DMT400003231	Potato	mitochondrion	20.73	24.84
EER91394	Sorghum	extracellular, plasma membrane	28.5	24.66
TraesCS1D01G178200.1	Wheat	extracellular	27.46	24.65
PGSC0003DMT400031359	Potato	endoplasmic reticulum, extracellular	24.35	24.35
TraesCS1B01G200600.1	Wheat	extracellular	26.42	23.94
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	27.98	23.68
PGSC0003DMT400049198	Potato	extracellular	25.39	23.33
PGSC0003DMT400066783	Potato	extracellular	24.87	23.3
Os10t0508700-01	Rice	extracellular	25.39	22.9
EER91393	Sorghum	extracellular	27.98	22.59
PGSC0003DMT400032573	Potato	cytosol	12.44	21.82

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:102596286	MapMan:35.1	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	UniProt:M1AQK6	PFAM:PF04043
EnsemblPlantsGene:PGSC0003DMG400010813	PGSC:PGSC0003DMG400010813	EnsemblPlants:PGSC0003DMT400028038	PANTHER:PTHR31080	PANTHER:PTHR31080:SF15	InterPro:Pectinesterase_inhib_dom
SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGRFAMs:TIGR01614	UniParc:UPI0002968CE2	RefSeq:XP_006362122.1

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400010813]

Coordinates

chr3:+:40065868..40066550

Molecular Weight (calculated)

20842.4 Da

IEP (calculated)

9.426

GRAVY (calculated)

0.059

Length

193 amino acids

Sequence
(BLAST)

001: MEVSICKGFI LPLLTIVLFI SLSQTATAAN EAYTNFIKTK CNVTTYISLC QKTLIPYASS VKTNSTKLCK AALDVTIKGA KNTSTTVSTL KKQKGITRIE
101: ASIIKDCIED VKDAVYELKQ AVDAMGHLGD KDKEFQLANA KTYASSVITD ADSCTDGFSG RKVNPTVKKM INSSMANITK LASNALALIN HLF

Best Arabidopsis Sequence Match ( AT4G25250.1 )
(BLAST)

001: MLRFVVLSLT LMVFINSSNF PKTAATPPGT YQNHTTYVKT ACNSTTYPTM CYNCLSSYSS TIKSDPIKLC TTSLNLNVKS AKNATLVVSN LLQKAKAAKS
101: HEVSILKDCV DEMKDTIDEL KQAVAEMKYV RGGGKTTEEH LKNVKTWVSS ALTDEGTCTD GFEEGRVNVE TKKKVKKAIS ELSKTTSNTL ALLTHYLSY

Arabidopsis Description

PMEI4Pectinesterase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.