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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • mitochondrion 1
  • extracellular 3
  • plasma membrane 3
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400032573 Potato cytosol 33.88 56.36
VIT_00s0323g00050.t01 Wine grape extracellular 61.2 56.28
KRH77402 Soybean extracellular 56.28 50.74
PGSC0003DMT400055550 Potato extracellular 51.37 48.96
PGSC0003DMT400028031 Potato extracellular 51.37 47.96
CDY31841 Canola endoplasmic reticulum, extracellular 51.37 46.31
CDY46921 Canola endoplasmic reticulum, extracellular 51.37 46.31
Bra027019.1-P Field mustard endoplasmic reticulum, extracellular 50.82 45.81
KRH04067 Soybean extracellular 53.01 45.54
GSMUA_Achr11P... Banana extracellular 40.98 44.91
AT4G12390.1 Thale cress endoplasmic reticulum, plasma membrane 50.27 44.66
CDY65618 Canola extracellular 50.27 44.66
KRH57338 Soybean endoplasmic reticulum, extracellular 51.91 44.19
AT1G62770.1 Thale cress endoplasmic reticulum, extracellular, vacuole 49.18 44.12
GSMUA_Achr1P00870_001 Banana extracellular 40.44 44.05
CDY34685 Canola extracellular 49.18 43.69
Bra029450.1-P Field mustard endoplasmic reticulum, extracellular 48.63 43.63
CDX86708 Canola endoplasmic reticulum, vacuole 48.63 43.63
CDX97343 Canola endoplasmic reticulum, plasma membrane 48.63 43.2
CDY52309 Canola endoplasmic reticulum, vacuole 48.09 43.14
Bra018475.1-P Field mustard endoplasmic reticulum, plasma membrane 48.09 42.72
Os06t0711800-01 Rice extracellular 45.9 42.0
GSMUA_Achr8P12460_001 Banana extracellular 38.8 41.76
PGSC0003DMT400031363 Potato plastid 45.36 41.29
GSMUA_Achr5P12890_001 Banana endoplasmic reticulum 39.89 40.11
GSMUA_Achr3P26730_001 Banana extracellular 37.7 39.88
PGSC0003DMT400031362 Potato extracellular 43.72 39.41
KXG20844 Sorghum extracellular 42.62 38.61
Os04t0106000-01 Rice extracellular 37.16 38.42
TraesCS7D01G400200.1 Wheat extracellular, golgi 42.62 38.24
TraesCS7B01G306500.1 Wheat extracellular, golgi 42.62 38.24
HORVU7Hr1G095080.4 Barley mitochondrion, plastid 42.62 38.24
PGSC0003DMT400072092 Potato endoplasmic reticulum, extracellular, vacuole 40.98 37.88
TraesCS7A01G406500.1 Wheat extracellular, golgi 42.08 37.56
PGSC0003DMT400066783 Potato extracellular 42.08 37.38
PGSC0003DMT400003231 Potato mitochondrion 32.79 37.27
PGSC0003DMT400028042 Potato endoplasmic reticulum, extracellular 42.08 36.84
KXG20845 Sorghum extracellular 41.53 35.02
PGSC0003DMT400031359 Potato endoplasmic reticulum, extracellular 36.61 34.72
Zm00001d014757_P001 Maize extracellular, vacuole 40.44 34.58
PGSC0003DMT400035274 Potato extracellular 35.52 34.39
Zm00001d036431_P001 Maize extracellular 40.98 33.94
PGSC0003DMT400067636 Potato cytosol 31.69 33.14
PGSC0003DMT400049198 Potato extracellular 37.7 32.86
PGSC0003DMT400007510 Potato extracellular 33.88 31.96
EES11737 Sorghum extracellular 37.16 31.78
Zm00001d024913_P001 Maize extracellular 34.97 31.53
TraesCS2D01G035100.1 Wheat extracellular 34.43 29.58
TraesCS2A01G036100.1 Wheat extracellular 33.88 29.25
TraesCS2B01G049000.1 Wheat extracellular 33.88 29.11
PGSC0003DMT400028038 Potato endoplasmic reticulum, extracellular 30.05 28.5
PGSC0003DMT400071010 Potato extracellular 28.96 27.04
PGSC0003DMT400028039 Potato extracellular 27.32 14.79
Protein Annotations
EnsemblPlants:PGSC0003DMT400012073EnsemblPlantsGene:PGSC0003DMG400004735Gene3D:1.20.140.40GO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234GO:GO:0043086InterPro:IPR035513InterPro:Invertase/methylesterase_inhibInterPro:Pectinesterase_inhib_domPANTHER:PTHR31080
PANTHER:PTHR31080:SF30PFAM:PF04043PGSC:PGSC0003DMG400004735SEG:segSMART:SM00856SUPFAM:SSF101148
TIGRFAMs:TIGR01614UniParc:UPI0002964423UniProt:M1A0N2MapMan:35.1::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400004735]
Coordinates
chr8:-:52827701..52828621
Molecular Weight (calculated)
19967.2 Da
IEP (calculated)
10.347
GRAVY (calculated)
-0.119
Length
183 amino acids
Sequence
(BLAST)
001: MAKSAMTSNP AAIKFIKVSC KATLYPVLCV QCLSAFANTV KQSEQQLAHA ALSVSLSKAK STMIFVSKLN RMRGLKPREK QAVKDCLDTM SDSIDQINKS
101: IPELGHTGQF STGQDFMWHV SNVQTWVSAA LTDENTCLDG FSGRGMNGNV KAALRLRILH VAQVTSNALA LVNRFADRHR PSP
Best Arabidopsis Sequence Match ( AT5G62350.1 )
(BLAST)
001: MAKQYLFVLL SISYLLSLEL TAATAASQTG ASKKAINFIQ SSCKTTTYPA LCVHSLSVYA NDIQTSPKRL AETAIAVTLS RAQSTKLFVS RLTRMKGLKK
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY
Arabidopsis Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.