Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- plastid 2
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86708 | Canola | endoplasmic reticulum, vacuole | 88.35 | 89.22 |
| CDY52309 | Canola | endoplasmic reticulum, vacuole | 87.86 | 88.73 |
| Bra029450.1-P | Field mustard | endoplasmic reticulum, extracellular | 87.86 | 88.73 |
| CDY65618 | Canola | extracellular | 87.86 | 87.86 |
| CDX97343 | Canola | endoplasmic reticulum, plasma membrane | 87.86 | 87.86 |
| Bra018475.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 86.89 | 86.89 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 53.4 | 53.92 |
| VIT_00s0323g00050.t01 | Wine grape | extracellular | 49.51 | 51.26 |
| KRH77402 | Soybean | extracellular | 50.49 | 51.23 |
| PGSC0003DMT400032573 | Potato | cytosol | 27.18 | 50.91 |
| PGSC0003DMT400012073 | Potato | plastid | 44.66 | 50.27 |
| GSMUA_Achr11P... | Banana | extracellular | 38.35 | 47.31 |
| GSMUA_Achr8P12460_001 | Banana | extracellular | 37.86 | 45.88 |
| GSMUA_Achr1P00870_001 | Banana | extracellular | 37.38 | 45.83 |
| GSMUA_Achr3P26730_001 | Banana | extracellular | 37.86 | 45.09 |
| AT5G62350.1 | Thale cress | extracellular | 43.69 | 44.55 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 42.72 | 43.78 |
| AT3G47380.1 | Thale cress | extracellular | 42.23 | 43.07 |
| KRH04067 | Soybean | extracellular | 43.69 | 42.25 |
| Solyc08g007450.1.1 | Tomato | extracellular | 41.26 | 42.08 |
| Os04t0106000-01 | Rice | extracellular | 33.98 | 39.55 |
| KRH57338 | Soybean | endoplasmic reticulum, extracellular | 41.26 | 39.53 |
| GSMUA_Achr5P12890_001 | Banana | endoplasmic reticulum | 34.47 | 39.01 |
| Os06t0711800-01 | Rice | extracellular | 37.86 | 39.0 |
| KXG20844 | Sorghum | extracellular | 36.89 | 37.62 |
| Zm00001d024913_P001 | Maize | extracellular | 36.41 | 36.95 |
| TraesCS7D01G400200.1 | Wheat | extracellular, golgi | 36.41 | 36.76 |
| TraesCS7B01G306500.1 | Wheat | extracellular, golgi | 35.92 | 36.27 |
| TraesCS7A01G406500.1 | Wheat | extracellular, golgi | 35.92 | 36.1 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 35.44 | 35.96 |
| HORVU7Hr1G095080.4 | Barley | mitochondrion, plastid | 35.44 | 35.78 |
| Zm00001d036431_P001 | Maize | extracellular | 37.86 | 35.29 |
| Zm00001d014757_P001 | Maize | extracellular, vacuole | 35.92 | 34.58 |
| KXG20845 | Sorghum | extracellular | 35.92 | 34.1 |
| EES11737 | Sorghum | extracellular | 34.95 | 33.64 |
| AT1G14890.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 34.95 | 32.88 |
| TraesCS2A01G036100.1 | Wheat | extracellular | 33.5 | 32.55 |
| TraesCS2D01G035100.1 | Wheat | extracellular | 33.5 | 32.39 |
| AT1G70720.2 | Thale cress | plastid | 33.01 | 32.08 |
| TraesCS2B01G049000.1 | Wheat | extracellular | 33.01 | 31.92 |
| AT1G23205.1 | Thale cress | endoplasmic reticulum, vacuole | 30.58 | 30.73 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 32.52 | 30.18 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 30.58 | 30.14 |
| AT3G62820.1 | Thale cress | extracellular | 28.16 | 29.9 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 29.61 | 29.33 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 33.5 | 28.87 |
| AT5G51520.1 | Thale cress | extracellular | 28.16 | 28.43 |
| AT4G25250.1 | Thale cress | extracellular | 25.73 | 26.63 |
| AT1G62760.1 | Thale cress | plastid | 38.35 | 25.32 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:826848 | ProteinID:AEE83124.1 | ArrayExpress:AT4G12390 | EnsemblPlantsGene:AT4G12390 |
| RefSeq:AT4G12390 | TAIR:AT4G12390 | RefSeq:AT4G12390-TAIR-G | EnsemblPlants:AT4G12390.1 | TAIR:AT4G12390.1 | EMBL:AY054507 |
| EMBL:AY081678 | ProteinID:CAB45986.1 | ProteinID:CAB78282.1 | GO:GO:0003674 | GO:GO:0004857 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0009506 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib |
| RefSeq:NP_192976.1 | PFAM:PF04043 | Symbol:PME1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF30 | InterPro:Pectinesterase_inhib_dom |
| UniProt:Q9STH2 | SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM | TIGRFAMs:TIGR01614 | UniParc:UPI000004893F |
| SEG:seg | : | : | : | : | : |
Description
PME1Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]
Coordinates
chr4:+:7336330..7338180
Molecular Weight (calculated)
23079.2 Da
IEP (calculated)
10.259
GRAVY (calculated)
-0.079
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKLTHLCY CLLLFLPLLC QSTIAKPSSS PNPSSSINFI VSSCRVTRYQ TLCVKCLAAF ADKIRRNENQ LAQTALAVTL VRVQSTTIYV GKLTKARRIK
101: RREYLAVKDC VENLGDGLEM LAQSMRELKQ VGRSGRDRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARHKS
101: RREYLAVKDC VENLGDGLEM LAQSMRELKQ VGRSGRDRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARHKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.