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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 19038476
extracellular: 19226311
msms PMID: 19226311 doi
WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG20844 Sorghum extracellular 75.5 74.75
TraesCS7D01G400200.1 Wheat extracellular, golgi 75.0 73.53
TraesCS7B01G306500.1 Wheat extracellular, golgi 75.0 73.53
HORVU7Hr1G095080.4 Barley mitochondrion, plastid 74.5 73.04
TraesCS7A01G406500.1 Wheat extracellular, golgi 74.0 72.2
Zm00001d014757_P001 Maize extracellular, vacuole 74.0 69.16
KXG20845 Sorghum extracellular 74.0 68.2
Zm00001d036431_P001 Maize extracellular 73.0 66.06
GSMUA_Achr3P26730_001 Banana extracellular 50.5 58.38
PGSC0003DMT400012073 Potato plastid 42.0 45.9
Os04t0106000-01 Rice extracellular 40.5 45.76
VIT_00s0323g00050.t01 Wine grape extracellular 44.5 44.72
VIT_16s0022g00960.t01 Wine grape extracellular, vacuole 42.5 42.93
PGSC0003DMT400032573 Potato cytosol 23.5 42.73
KRH04067 Soybean extracellular 44.0 41.31
KRH77402 Soybean extracellular 41.5 40.89
KRH57338 Soybean endoplasmic reticulum, extracellular 43.5 40.47
PGSC0003DMT400028031 Potato extracellular 39.5 40.31
PGSC0003DMT400055550 Potato extracellular 38.5 40.1
Solyc08g007450.1.1 Tomato extracellular 40.0 39.6
Solyc06g034370.1.1 Tomato extracellular 38.0 39.58
CDX92687 Canola extracellular 39.0 38.81
CDX89429 Canola extracellular 39.0 38.81
AT4G25260.1 Thale cress endoplasmic reticulum, extracellular 39.0 38.81
CDX86708 Canola endoplasmic reticulum, vacuole 39.5 38.73
Bra029450.1-P Field mustard endoplasmic reticulum, extracellular 39.5 38.73
CDY52309 Canola endoplasmic reticulum, vacuole 39.5 38.73
CDX94463 Canola extracellular 38.5 38.31
CDY11066 Canola extracellular 38.5 38.31
Bra019179.1-P Field mustard extracellular 38.5 38.31
Bra013881.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 38.5 38.12
AT4G12390.1 Thale cress endoplasmic reticulum, plasma membrane 39.0 37.86
Bra018157.1-P Field mustard plastid 34.5 37.3
AT5G62350.1 Thale cress extracellular 37.5 37.13
CDY31841 Canola endoplasmic reticulum, extracellular 37.5 36.95
CDY65618 Canola extracellular 38.0 36.89
KRH62602 Soybean nucleus 35.5 36.79
CDY46921 Canola endoplasmic reticulum, extracellular 37.0 36.45
CDY34685 Canola extracellular 37.5 36.41
CDX97343 Canola endoplasmic reticulum, plasma membrane 37.5 36.41
AT1G62770.1 Thale cress endoplasmic reticulum, extracellular, vacuole 37.0 36.27
Bra027019.1-P Field mustard endoplasmic reticulum, extracellular 36.5 35.96
CDY00278 Canola extracellular 36.5 35.78
CDX86904 Canola extracellular 36.5 35.78
Bra010075.1-P Field mustard extracellular 36.5 35.78
CDY70789 Canola extracellular 36.0 35.64
CDX99059 Canola extracellular 36.0 35.64
Bra018475.1-P Field mustard endoplasmic reticulum, plasma membrane 36.5 35.44
AT3G47380.1 Thale cress extracellular 35.5 35.15
KRH56361 Soybean plastid 34.5 34.85
CDY30715 Canola endoplasmic reticulum, extracellular 35.0 34.83
Bra029267.1-P Field mustard endoplasmic reticulum, extracellular 34.5 34.33
Solyc01g091110.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 35.5 33.18
Solyc10g018320.1.1 Tomato extracellular 33.5 32.52
PGSC0003DMT400003231 Potato mitochondrion 25.5 31.68
PGSC0003DMT400066783 Potato extracellular 32.5 31.55
Os10t0508700-01 Rice extracellular 33.5 31.31
Solyc01g091100.2.1 Tomato extracellular 31.5 30.58
KRH76196 Soybean endoplasmic reticulum, plasma membrane 31.0 28.97
CDY63067 Canola extracellular 30.5 28.91
Bra037313.1-P Field mustard extracellular 30.5 28.91
AT4G00080.1 Thale cress endoplasmic reticulum, extracellular, vacuole 30.0 28.71
Solyc10g018330.1.1 Tomato endoplasmic reticulum, extracellular 32.0 28.7
Bra000562.1-P Field mustard endoplasmic reticulum, extracellular 29.0 28.02
CDY21496 Canola endoplasmic reticulum, extracellular 29.0 28.02
CDX83212 Canola endoplasmic reticulum, extracellular 29.0 28.02
KRH65345 Soybean endoplasmic reticulum, vacuole 30.5 27.85
KRH65346 Soybean endoplasmic reticulum, extracellular 29.5 27.06
Os10t0185400-00 Rice extracellular 29.5 25.99
Os10t0186200-00 Rice plasma membrane, plastid 27.0 22.22
KRH76197 Soybean endoplasmic reticulum, extracellular 16.0 20.78
Protein Annotations
Gene3D:1.20.140.40MapMan:35.1EntrezGene:4342040EMBL:AK069642ProteinID:BAF20467.1ProteinID:BAS99457.1
GO:GO:0003674GO:GO:0004857GO:GO:0008150GO:GO:0030234GO:GO:0043086InterPro:IPR035513
InterPro:Invertase/methylesterase_inhibEnsemblPlantsGene:Os06g0711800EnsemblPlants:Os06t0711800-01PFAM:PF04043PANTHER:PTHR31080PANTHER:PTHR31080:SF3
InterPro:Pectinesterase_inhib_domUniProt:Q0D9K6SMART:SM00856SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614
TMHMM:TMhelixUniParc:UPI0000E12958RefSeq:XP_015641888.1SEG:seg::
Description
Pectinesterase inhibitor domain containing protein. (Os06t0711800-01)
Coordinates
chr6:-:30105940..30106833
Molecular Weight (calculated)
20109.8 Da
IEP (calculated)
9.128
GRAVY (calculated)
0.013
Length
200 amino acids
Sequence
(BLAST)
001: MSRSSLAMAL LLAAFAAAAT ANSGAAPAAS DFIRKSCRAT QYPAVCVQSL ASYGGAGAPP PRSPRELARA ALSVSVDKAR SASTYVGHIC GPGGGRGGAG
101: GAGPVRDCLE NMADSVGHLR DAAQELGGNM GRAGSPGFKW HLSNVQTWCS AALTDENTCL DGLSRGVDAA TRSAIRGKIV EVAQVTSNAL ALVNRVAPAN
Best Arabidopsis Sequence Match ( AT1G62770.1 )
(BLAST)
001: MELKNTIFLV ILLSITILQS SSATPNRSES DQFIVSSCQT TQYPSLCVHT LSAYATKIRH NNDQDLAQTA LIISLARAKS VTIFVAKLTK ETPKFKRREY
101: LAIKDCIEVL GNSVDRLAQS VKELARAGHA VASEDFMWKM SNVQTWVSAA LTDETTCLDG FSERAMGGKV KRLIRYKVVH VAQVTSNALA LVNQFAEKRS
201: VKFP
Arabidopsis Description
PMEI9Pectinesterase inhibitor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI72]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.