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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46921 Canola endoplasmic reticulum, extracellular 85.92 87.19
AT1G62770.1 Thale cress endoplasmic reticulum, extracellular, vacuole 84.47 85.29
CDY31841 Canola endoplasmic reticulum, extracellular 83.98 85.22
VIT_00s0323g00050.t01 Wine grape extracellular 53.88 55.78
CDY65618 Canola extracellular 52.91 52.91
KRH77402 Soybean extracellular 51.94 52.71
CDX86708 Canola endoplasmic reticulum, vacuole 51.94 52.45
CDX97343 Canola endoplasmic reticulum, plasma membrane 52.43 52.43
CDY52309 Canola endoplasmic reticulum, vacuole 51.46 51.96
PGSC0003DMT400012073 Potato plastid 43.69 49.18
GSMUA_Achr11P... Banana extracellular 39.32 48.5
GSMUA_Achr1P00870_001 Banana extracellular 38.35 47.02
PGSC0003DMT400032573 Potato cytosol 24.76 46.36
KRH04067 Soybean extracellular 47.57 46.01
GSMUA_Achr8P12460_001 Banana extracellular 37.86 45.88
CDX89429 Canola extracellular 44.66 45.77
CDX94463 Canola extracellular 44.17 45.27
KRH57338 Soybean endoplasmic reticulum, extracellular 46.6 44.65
CDX92687 Canola extracellular 42.72 43.78
CDY11066 Canola extracellular 42.23 43.28
GSMUA_Achr3P26730_001 Banana extracellular 35.92 42.77
CDX86904 Canola extracellular 41.75 42.16
CDY00278 Canola extracellular 41.75 42.16
Solyc08g007450.1.1 Tomato extracellular 41.26 42.08
GSMUA_Achr5P12890_001 Banana endoplasmic reticulum 36.41 41.21
CDY30715 Canola endoplasmic reticulum, extracellular 39.32 40.3
CDX99059 Canola extracellular 39.32 40.1
TraesCS7B01G306500.1 Wheat extracellular, golgi 38.35 38.73
CDX87244 Canola plastid 37.38 38.69
CDY70789 Canola extracellular 37.86 38.61
CDY16561 Canola extracellular 36.41 38.27
CDY16779 Canola plastid 36.89 38.19
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 36.89 38.0
TraesCS7D01G400200.1 Wheat extracellular, golgi 37.38 37.75
TraesCS7A01G406500.1 Wheat extracellular, golgi 37.38 37.56
Os06t0711800-01 Rice extracellular 36.41 37.5
CDY00279 Canola endoplasmic reticulum, extracellular 35.92 37.37
CDY31839 Canola endoplasmic reticulum, extracellular 36.89 37.25
CDY46918 Canola endoplasmic reticulum, extracellular 36.89 37.25
HORVU7Hr1G095080.4 Barley mitochondrion, plastid 36.41 36.76
Os04t0106000-01 Rice extracellular 31.07 36.16
KXG20844 Sorghum extracellular 35.44 36.14
CDY72130 Canola extracellular 34.95 35.47
CDX92436 Canola extracellular 34.47 34.98
CDX70942 Canola extracellular 34.47 34.8
Zm00001d014757_P001 Maize extracellular, vacuole 35.92 34.58
CDX92686 Canola cytosol, nucleus, plastid 14.56 34.48
CDY21496 Canola endoplasmic reticulum, extracellular 34.47 34.3
KXG20845 Sorghum extracellular 35.92 34.1
CDX83212 Canola endoplasmic reticulum, extracellular 33.98 33.82
EES11737 Sorghum extracellular 34.95 33.64
Zm00001d024913_P001 Maize extracellular 33.01 33.5
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 32.52 33.33
Zm00001d036431_P001 Maize extracellular 35.44 33.03
CDY52024 Canola endoplasmic reticulum, extracellular 32.04 32.84
CDY63067 Canola extracellular 33.01 32.23
CDY03725 Canola extracellular 30.58 31.34
CDY45298 Canola endoplasmic reticulum, extracellular 30.58 31.34
CDY72606 Canola endoplasmic reticulum, extracellular 31.07 30.33
CDY09473 Canola extracellular 29.61 30.2
TraesCS2A01G036100.1 Wheat extracellular 31.07 30.19
CDX91588 Canola extracellular 30.58 30.14
TraesCS2D01G035100.1 Wheat extracellular 31.07 30.05
CDY70934 Canola extracellular 29.61 29.9
CDY53526 Canola endoplasmic reticulum, extracellular 26.21 29.67
CDY11065 Canola extracellular 28.64 29.65
CDY48809 Canola endoplasmic reticulum, vacuole 29.61 29.47
CDY09429 Canola endoplasmic reticulum, vacuole 29.61 29.47
CDY00484 Canola extracellular 29.13 29.41
CDY68609 Canola extracellular 29.13 29.41
CDY04097 Canola endoplasmic reticulum, vacuole 29.13 29.41
TraesCS2B01G049000.1 Wheat extracellular 30.1 29.11
CDY23485 Canola endoplasmic reticulum, extracellular 29.61 29.05
CDX68333 Canola extracellular 29.61 28.91
CDX80124 Canola extracellular, vacuole 28.64 28.64
CDY53010 Canola extracellular, plasma membrane 28.64 28.64
CDY25774 Canola endoplasmic reticulum, plastid 31.07 28.57
CDY17457 Canola endoplasmic reticulum, vacuole 28.16 28.43
CDX94465 Canola extracellular 26.7 27.64
CDX89432 Canola extracellular 26.7 27.64
CDX89431 Canola extracellular 26.7 27.64
CDX76665 Canola plastid 25.24 27.51
CDY11451 Canola extracellular, plastid 24.27 26.45
CDY21423 Canola plastid 23.79 26.34
CDY36241 Canola endoplasmic reticulum, vacuole 26.7 25.94
CDY17658 Canola endoplasmic reticulum, vacuole 26.21 25.47
CDY11064 Canola extracellular 28.64 24.38
CDX94464 Canola extracellular 22.82 24.1
CDX89430 Canola extracellular 21.84 23.08
Protein Annotations
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11Gene3D:1.20.140.40MapMan:35.1GO:A0A078H839UniProt:A0A078H839
EnsemblPlants:CDY34685ProteinID:CDY34685ProteinID:CDY34685.1GO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234GO:GO:0043086EnsemblPlantsGene:GSBRNA2T00057191001InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043
PANTHER:PTHR31080PANTHER:PTHR31080:SF30MetaCyc:PWY-1081MetaCyc:PWY-7246MetaCyc:PWY-7248InterPro:Pectinesterase_inhib_dom
SMART:SM00856SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614UniPathway:UPA00545UniParc:UPI0004EBB62A
SEG:seg:::::
Description
BnaC04g19980DBnaC04g19980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H839]
Coordinates
chrLK032339:-:285061..285905
Molecular Weight (calculated)
22693.6 Da
IEP (calculated)
9.895
GRAVY (calculated)
0.066
Length
206 amino acids
Sequence
(BLAST)
001: MEPKYTIFLA LLLSTTTLQC SSANANRSGL DPFILSSCQT TRYPSLCVRT LSAYATKIRH NNDQDLAQTA LTISLARARS VAIFVAKLTK GYVLICFKRR
101: EYLAIKDCIE VLGNSVDRLG QSVKELSRAG HAVASEDFMW KMSNVQTWVS AALTDETTCL DGFSGQAMGG KVKRLIRFKV VHVAQVTSNA LALVNHFAEK
201: RSVQIP
Best Arabidopsis Sequence Match ( AT1G62770.1 )
(BLAST)
001: MELKNTIFLV ILLSITILQS SSATPNRSES DQFIVSSCQT TQYPSLCVHT LSAYATKIRH NNDQDLAQTA LIISLARAKS VTIFVAKLTK ETPKFKRREY
101: LAIKDCIEVL GNSVDRLAQS VKELARAGHA VASEDFMWKM SNVQTWVSAA LTDETTCLDG FSERAMGGKV KRLIRYKVVH VAQVTSNALA LVNQFAEKRS
201: VKFP
Arabidopsis Description
PMEI9Pectinesterase inhibitor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI72]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.