CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52024	Canola	endoplasmic reticulum, extracellular	96.52	96.52
Bra016678.1-P	Field mustard	endoplasmic reticulum, extracellular	96.02	96.02
CDY45298	Canola	endoplasmic reticulum, extracellular	84.58	84.58
CDY53526	Canola	endoplasmic reticulum, extracellular	75.62	83.52
AT1G14890.1	Thale cress	cytosol, golgi, mitochondrion, plastid	85.57	78.54
CDY04097	Canola	endoplasmic reticulum, vacuole	59.2	58.33
CDY48809	Canola	endoplasmic reticulum, vacuole	59.2	57.49
CDY09429	Canola	endoplasmic reticulum, vacuole	58.71	57.0
CDY17457	Canola	endoplasmic reticulum, vacuole	57.71	56.86
KRH41681	Soybean	extracellular	55.72	52.34
KRH60383	Soybean	extracellular	54.23	50.93
KRH38255	Soybean	extracellular	49.75	48.08
VIT_01s0011g05410.t01	Wine grape	extracellular	48.76	47.34
PGSC0003DMT400049198	Potato	extracellular	46.27	44.29
Solyc10g076730.1.1	Tomato	extracellular	46.27	44.29
CDY72606	Canola	endoplasmic reticulum, extracellular	46.27	44.08
VIT_01s0011g05390.t01	Wine grape	extracellular	46.27	43.06
CDY36241	Canola	endoplasmic reticulum, vacuole	44.28	41.98
CDY25774	Canola	endoplasmic reticulum, plastid	46.27	41.52
CDY17658	Canola	endoplasmic reticulum, vacuole	42.79	40.57
CDY03725	Canola	extracellular	39.3	39.3
CDY21423	Canola	plastid	36.32	39.25
CDY09473	Canola	extracellular	38.81	38.61
CDY23485	Canola	endoplasmic reticulum, extracellular	38.31	36.67
CDX68333	Canola	extracellular	38.31	36.49
CDY30715	Canola	endoplasmic reticulum, extracellular	35.82	35.82
CDY11066	Canola	extracellular	35.82	35.82
CDY52309	Canola	endoplasmic reticulum, vacuole	36.32	35.78
CDX86708	Canola	endoplasmic reticulum, vacuole	36.32	35.78
CDX99059	Canola	extracellular	35.82	35.64
CDY70789	Canola	extracellular	35.82	35.64
GSMUA_Achr6P05900_001	Banana	extracellular	36.32	35.44
CDX92687	Canola	extracellular	35.32	35.32
GSMUA_Achr2P15160_001	Banana	extracellular	34.83	35.0
CDY65618	Canola	extracellular	35.82	34.95
CDY00278	Canola	extracellular	35.32	34.8
CDX86904	Canola	extracellular	35.32	34.8
CDX92686	Canola	cytosol, nucleus, plastid	14.93	34.48
CDX97343	Canola	endoplasmic reticulum, plasma membrane	34.83	33.98
CDX89429	Canola	extracellular	33.83	33.83
CDX94463	Canola	extracellular	33.83	33.83
CDY31839	Canola	endoplasmic reticulum, extracellular	33.83	33.33
CDY46921	Canola	endoplasmic reticulum, extracellular	33.33	33.0
CDY31841	Canola	endoplasmic reticulum, extracellular	33.33	33.0
CDY46918	Canola	endoplasmic reticulum, extracellular	33.33	32.84
CDX87244	Canola	plastid	32.34	32.66
CDY16561	Canola	extracellular	31.84	32.65
CDY34685	Canola	extracellular	33.33	32.52
CDY16779	Canola	plastid	31.84	32.16
CDY72130	Canola	extracellular	32.34	32.02
CDX92436	Canola	extracellular	32.34	32.02
GSMUA_Achr8P30920_001	Banana	extracellular	31.34	31.82
CDX70942	Canola	extracellular	31.34	30.88
CDX86901	Canola	endoplasmic reticulum, extracellular, plastid	30.35	30.5
CDY00279	Canola	endoplasmic reticulum, extracellular	29.85	30.3
CDX83212	Canola	endoplasmic reticulum, extracellular	29.85	28.99
CDY21496	Canola	endoplasmic reticulum, extracellular	29.85	28.99
CDY11065	Canola	extracellular	28.36	28.64
CDY68609	Canola	extracellular	28.86	28.43
CDY00484	Canola	extracellular	28.86	28.43
Os10t0185400-00	Rice	extracellular	31.84	28.19
CDY63067	Canola	extracellular	29.35	27.96
EES08718	Sorghum	endoplasmic reticulum, plasma membrane, plastid	31.84	27.71
Zm00001d030035_P001	Maize	endoplasmic reticulum, extracellular	29.85	27.4
CDX91588	Canola	extracellular	28.36	27.27
CDX89432	Canola	extracellular	26.87	27.14
CDX94465	Canola	extracellular	26.87	27.14
CDX76665	Canola	plastid	25.37	26.98
CDY70934	Canola	extracellular	27.36	26.96
EER94449	Sorghum	plastid	29.35	26.94
CDX80124	Canola	extracellular, vacuole	27.36	26.7
CDX89431	Canola	extracellular	26.37	26.63
CDY11451	Canola	extracellular, plastid	24.88	26.45
CDY53010	Canola	extracellular, plasma membrane	26.87	26.21
Zm00001d052935_P001	Maize	mitochondrion	30.85	25.51
TraesCS3B01G482700.1	Wheat	plastid	27.36	24.34
CDY11064	Canola	extracellular	28.36	23.55
OQU92294	Sorghum	extracellular, plastid	26.37	23.45
TraesCS3A01G447100.1	Wheat	extracellular, plasma membrane	25.87	22.91
CDX89430	Canola	extracellular	20.9	21.54
TraesCS3D01G439800.1	Wheat	plastid	23.88	21.24
CDX94464	Canola	extracellular	20.4	21.03
Os10t0186200-00	Rice	plasma membrane, plastid	23.88	19.75

Protein Annotations

KEGG:00040+3.1.1.11	KEGG:00500+3.1.1.11	Gene3D:1.20.140.40	MapMan:35.1	GO:A0A078D6K3	EnsemblPlants:CDX83999
ProteinID:CDX83999	ProteinID:CDX83999.1	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150	GO:GO:0030234
EnsemblPlantsGene:GSBRNA2T00139804001	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	PFAM:PF04043	PANTHER:PTHR31080	PANTHER:PTHR31080:SF10
MetaCyc:PWY-1081	MetaCyc:PWY-7246	MetaCyc:PWY-7248	InterPro:Pectinesterase_inhib_dom	SMART:SM00856	SUPFAM:SSF101148
SignalP:SignalP-noTM	TIGRFAMs:TIGR01614	UniPathway:UPA00545	UniParc:UPI0004EEA6B5	SEG:seg	:

Description

BnaC08g16460D

Coordinates

chrLK031834:-:1658686..1659481

Molecular Weight (calculated)

21898.8 Da

IEP (calculated)

7.097

GRAVY (calculated)

-0.197

Length

201 amino acids

Sequence
(BLAST)

001: MARQLYTTAF LHLATLLFIS RTFSAVRFPP QPTPTNDLDF IRSSCNATLY PDVCFTSLAG YASAVQDNPA KLAKLAIGVS LSRAKHTARY LSKLSRTAAS
101: AAVHDCVSNV GDAVEQMHGS LQQLREMNHH RQGAPAFRFQ MSNVQTWMSA ALTDEETCTD GVTEEMEDGD TKTAVCERVG DVKRFTSNAL ALVNTYANNG
201: A

Best Arabidopsis Sequence Match ( AT1G14890.1 )
(BLAST)

001: MLTRNKEEIN RVKNLKLKMG RQLYTTTVLY LVTLLFICRT ISAVRFPPEQ PTTDDLDFIR TSCNTTLYPD VCYTSLAGYA SAVQDNPARL AKLAIGVSLS
101: RAKYTAAYLS KLSRRAASAA VHDCVSNVGD AVDQMRGSLR QLREMNHRRP GDPAFRFQMS NVQTWMSAAL TDEETCTDGV TEEMEDGETK TAICDRVADV
201: KRFTSNALAL VNTYANNGA

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HXW0]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.