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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d030035_P001 Maize endoplasmic reticulum, extracellular 83.11 83.11
TraesCS3B01G482700.1 Wheat plastid 53.88 52.21
TraesCS3A01G447100.1 Wheat extracellular, plasma membrane 53.42 51.54
TraesCS3D01G439800.1 Wheat plastid 50.68 49.12
Os10t0186200-00 Rice plasma membrane, plastid 52.97 47.74
EES08718 Sorghum endoplasmic reticulum, plasma membrane, plastid 45.21 42.86
GSMUA_Achr6P05900_001 Banana extracellular 36.07 38.35
GSMUA_Achr2P15160_001 Banana extracellular 33.79 37.0
OQU92294 Sorghum extracellular, plastid 35.62 34.51
GSMUA_Achr8P30920_001 Banana extracellular 28.31 31.31
KXG20844 Sorghum extracellular 28.31 30.69
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 26.94 29.35
KXG20845 Sorghum extracellular 28.77 29.03
VIT_01s0011g05410.t01 Wine grape extracellular 27.4 28.99
Bra016678.1-P Field mustard endoplasmic reticulum, extracellular 26.48 28.86
CDY53526 Canola endoplasmic reticulum, extracellular 23.74 28.57
EES11737 Sorghum extracellular 27.85 28.5
CDY52024 Canola endoplasmic reticulum, extracellular 26.03 28.36
KRH38255 Soybean extracellular 26.48 27.88
Bra026180.1-P Field mustard endoplasmic reticulum, extracellular 25.11 27.36
CDY45298 Canola endoplasmic reticulum, extracellular 25.11 27.36
KRH60383 Soybean extracellular 26.03 26.64
PGSC0003DMT400049198 Potato extracellular 25.11 26.19
Solyc10g076730.1.1 Tomato extracellular 25.11 26.19
KRH41681 Soybean extracellular 25.57 26.17
AT2G01610.1 Thale cress endoplasmic reticulum, extracellular 26.48 26.13
EER91394 Sorghum extracellular, plasma membrane 26.48 26.01
CDY04097 Canola endoplasmic reticulum, vacuole 24.2 25.98
Bra017437.1-P Field mustard endoplasmic reticulum, vacuole 24.2 25.98
VIT_01s0011g05390.t01 Wine grape extracellular 25.57 25.93
Bra026646.1-P Field mustard endoplasmic reticulum, vacuole 24.2 25.6
AT1G14890.1 Thale cress cytosol, golgi, mitochondrion, plastid 24.66 24.66
CDY48809 Canola endoplasmic reticulum, vacuole 23.29 24.64
CDY17457 Canola endoplasmic reticulum, vacuole 22.83 24.51
CDY72606 Canola endoplasmic reticulum, extracellular 23.29 24.17
Bra024570.1-P Field mustard extracellular, vacuole 24.2 24.09
Bra012366.1-P Field mustard endoplasmic reticulum, vacuole 22.83 23.92
Bra007939.1-P Field mustard extracellular 21.92 23.88
CDY03725 Canola extracellular 21.92 23.88
EER91393 Sorghum extracellular 26.03 23.85
CDY09473 Canola extracellular 21.92 23.76
CDY09429 Canola endoplasmic reticulum, vacuole 22.37 23.67
AT1G23205.1 Thale cress endoplasmic reticulum, vacuole 21.46 22.93
CDY23485 Canola endoplasmic reticulum, extracellular 21.92 22.86
CDY25774 Canola endoplasmic reticulum, plastid 23.29 22.77
CDX68333 Canola extracellular 21.92 22.75
Bra003945.1-P Field mustard extracellular 21.92 22.75
CDY21423 Canola plastid 19.18 22.58
AT1G70720.2 Thale cress plastid 21.46 22.17
Bra024869.1-P Field mustard endoplasmic reticulum, extracellular 20.09 20.75
CDY17658 Canola endoplasmic reticulum, vacuole 19.63 20.28
CDY36241 Canola endoplasmic reticulum, vacuole 19.63 20.28
Protein Annotations
Gene3D:1.20.140.40MapMan:35.2EntrezGene:8055607UniProt:C5WRB7EnsemblPlants:EER94449ProteinID:EER94449
ProteinID:EER94449.1GO:GO:0003674GO:GO:0004857GO:GO:0008150GO:GO:0030234GO:GO:0043086
InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043PANTHER:PTHR31080PANTHER:PTHR31080:SF63InterPro:Pectinesterase_inhib_dom
SMART:SM00856EnsemblPlantsGene:SORBI_3001G288400SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614UniParc:UPI0001A82EAF
RefSeq:XP_002467451.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:56505170..56506433
Molecular Weight (calculated)
21930.3 Da
IEP (calculated)
8.602
GRAVY (calculated)
0.490
Length
219 amino acids
Sequence
(BLAST)
001: MASAAAAFLL IIAGAAWPSL IDAAPSPSSS SFVPPPPCAP PRSAVEFLRA RCASTLYGVA CYESLLPYAC IFRTSHVKLA RAAGDVNAAW ISSISKRVKE
101: LVARGAAGGT AVAESAALRD CASTVSSAAG LAKQAAAELA KLDAAGGAVG SSNVRWAISN AQTWLSASMT NEATCADGVA ATGAAASSPV AREVVMAVVR
201: ARELTSIALA LVYGIPVPP
Best Arabidopsis Sequence Match ( AT1G62760.1 )
(BLAST)
001: MNILSQTQIL HLSIAILLFI TTSSSSLSPS SSSPSLSPSP PSSSPSSAPP SSLSPSSPPP LSLSPSSPPP PPPSSSPLSS LSPSLSPSPP SSSPSSAPPS
101: SLSPSSPPPL SLSPSSPPPP PPSSSPLSSL SPSSSSSTYS NQTNLDYIKT SCNITLYKTI CYNSLSPYAS TIRSNPQKLA VIALNLTLSS AKSASKFVKN
201: ISHGGGLTRL EVVAVADCVE EIGDSVTSLQ DSIRELDSIN YKDSAKFEMV MSDVETWVSA ALTNDDTCMD GFSLVKTAVK DLVRRHVVEV ARLTSNALAL
301: INMYASTQEN FS
Arabidopsis Description
PMEI10Pectinesterase inhibitor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI74]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.