Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- plastid 2
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012366.1-P | Field mustard | endoplasmic reticulum, vacuole | 81.95 | 80.38 |
| CDY72606 | Canola | endoplasmic reticulum, extracellular | 80.49 | 78.2 |
| CDY25774 | Canola | endoplasmic reticulum, plastid | 81.95 | 75.0 |
| Bra024570.1-P | Field mustard | extracellular, vacuole | 80.0 | 74.55 |
| CDY21423 | Canola | plastid | 64.88 | 71.51 |
| AT1G70720.2 | Thale cress | plastid | 60.98 | 58.96 |
| KRH41681 | Soybean | extracellular | 50.73 | 48.6 |
| KRH60383 | Soybean | extracellular | 49.76 | 47.66 |
| VIT_01s0011g05410.t01 | Wine grape | extracellular | 45.85 | 45.41 |
| KRH38255 | Soybean | extracellular | 45.85 | 45.19 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 45.85 | 42.34 |
| PGSC0003DMT400049198 | Potato | extracellular | 42.44 | 41.43 |
| VIT_01s0011g05390.t01 | Wine grape | extracellular | 43.41 | 41.2 |
| AT1G14890.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 43.9 | 41.1 |
| Solyc10g076730.1.1 | Tomato | extracellular | 41.95 | 40.95 |
| GSMUA_Achr6P05900_001 | Banana | extracellular | 33.17 | 33.01 |
| GSMUA_Achr2P15160_001 | Banana | extracellular | 31.71 | 32.5 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 31.71 | 32.34 |
| AT5G62350.1 | Thale cress | extracellular | 31.71 | 32.18 |
| AT4G12390.1 | Thale cress | endoplasmic reticulum, plasma membrane | 30.73 | 30.58 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 29.76 | 29.9 |
| AT3G47380.1 | Thale cress | extracellular | 29.27 | 29.7 |
| GSMUA_Achr8P30920_001 | Banana | extracellular | 28.29 | 29.29 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 28.78 | 29.06 |
| AT5G51520.1 | Thale cress | extracellular | 27.8 | 27.94 |
| AT3G62820.1 | Thale cress | extracellular | 26.34 | 27.84 |
| AT4G25250.1 | Thale cress | extracellular | 25.85 | 26.63 |
| Os10t0185400-00 | Rice | extracellular | 29.27 | 26.43 |
| EES08718 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 29.76 | 26.41 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 26.34 | 25.96 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 26.34 | 25.84 |
| Zm00001d052935_P001 | Maize | mitochondrion | 30.24 | 25.51 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 28.29 | 24.27 |
| OQU92294 | Sorghum | extracellular, plastid | 25.85 | 23.45 |
| Zm00001d030035_P001 | Maize | endoplasmic reticulum, extracellular | 24.88 | 23.29 |
| TraesCS3D01G439800.1 | Wheat | plastid | 25.37 | 23.01 |
| TraesCS3B01G482700.1 | Wheat | plastid | 24.88 | 22.57 |
| TraesCS3A01G447100.1 | Wheat | extracellular, plasma membrane | 24.88 | 22.47 |
| EER94449 | Sorghum | plastid | 22.93 | 21.46 |
| Os10t0186200-00 | Rice | plasma membrane, plastid | 23.41 | 19.75 |
| AT1G62760.1 | Thale cress | plastid | 28.29 | 18.59 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:838929 | ProteinID:AAC00599.1 | ProteinID:AAF87022.1 | ProteinID:AEE30356.1 |
| EMBL:AK222111 | ArrayExpress:AT1G23205 | EnsemblPlantsGene:AT1G23205 | RefSeq:AT1G23205 | TAIR:AT1G23205 | RefSeq:AT1G23205-TAIR-G |
| EnsemblPlants:AT1G23205.1 | TAIR:AT1G23205.1 | EMBL:BT025267 | ncoils:Coil | GO:GO:0003674 | GO:GO:0004857 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib | RefSeq:NP_173734.1 |
| UniProt:O49297 | PFAM:PF04043 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF10 |
| InterPro:Pectinesterase_inhib_dom | SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM | TIGRFAMs:TIGR01614 | UniParc:UPI000009CF92 |
| SEG:seg | : | : | : | : | : |
Description
At1g23205 [Source:UniProtKB/TrEMBL;Acc:O49297]
Coordinates
chr1:-:8233953..8235019
Molecular Weight (calculated)
22677.8 Da
IEP (calculated)
4.872
GRAVY (calculated)
-0.110
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLSLHQPLL FFFLASVLPL ILTVHSQSDD SDFIRTSCNT TLYPDLCFSS LSSFSSSVHN DPALLARAAI SVTLTKTLDL ASYLANITTL QPESNEDGAH
101: HPTAAAVFHD CFDNLKDAVE EMKGSMKQMR ELVSTGSLES FRFQMSNVQT WLSAALTDEE TCTDGFKDIH DEPRKDDICA RVDDVKKMTS NALALVNRCV
201: DKAIH
101: HPTAAAVFHD CFDNLKDAVE EMKGSMKQMR ELVSTGSLES FRFQMSNVQT WLSAALTDEE TCTDGFKDIH DEPRKDDICA RVDDVKKMTS NALALVNRCV
201: DKAIH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.