Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86904 | Canola | extracellular | 86.14 | 85.29 |
| CDY00278 | Canola | extracellular | 85.64 | 84.8 |
| Bra010075.1-P | Field mustard | extracellular | 85.64 | 84.8 |
| CDY30715 | Canola | endoplasmic reticulum, extracellular | 80.2 | 80.6 |
| Bra029267.1-P | Field mustard | endoplasmic reticulum, extracellular | 79.7 | 80.1 |
| AT3G47380.1 | Thale cress | extracellular | 64.36 | 64.36 |
| VIT_16s0022g00960.t01 | Wine grape | extracellular, vacuole | 52.97 | 54.04 |
| PGSC0003DMT400055550 | Potato | extracellular | 50.0 | 52.6 |
| Solyc06g034370.1.1 | Tomato | extracellular | 49.51 | 52.08 |
| PGSC0003DMT400028031 | Potato | extracellular | 48.02 | 49.49 |
| KRH56361 | Soybean | plastid | 47.03 | 47.98 |
| KRH62602 | Soybean | nucleus | 45.05 | 47.15 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 44.55 | 44.78 |
| AT4G12390.1 | Thale cress | endoplasmic reticulum, plasma membrane | 44.55 | 43.69 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 44.06 | 43.63 |
| GSMUA_Achr11P... | Banana | extracellular | 34.16 | 41.32 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 40.59 | 40.39 |
| GSMUA_Achr3P26730_001 | Banana | extracellular | 34.16 | 39.88 |
| GSMUA_Achr8P12460_001 | Banana | extracellular | 32.67 | 38.82 |
| GSMUA_Achr1P00870_001 | Banana | extracellular | 31.68 | 38.1 |
| Os06t0711800-01 | Rice | extracellular | 37.13 | 37.5 |
| TraesCS7D01G400200.1 | Wheat | extracellular, golgi | 37.62 | 37.25 |
| TraesCS7A01G406500.1 | Wheat | extracellular, golgi | 37.62 | 37.07 |
| TraesCS7B01G306500.1 | Wheat | extracellular, golgi | 37.13 | 36.76 |
| HORVU7Hr1G095080.4 | Barley | mitochondrion, plastid | 36.63 | 36.27 |
| KXG20844 | Sorghum | extracellular | 36.14 | 36.14 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 38.61 | 35.14 |
| Zm00001d036431_P001 | Maize | extracellular | 37.13 | 33.94 |
| Zm00001d014757_P001 | Maize | extracellular, vacuole | 35.15 | 33.18 |
| KXG20845 | Sorghum | extracellular | 35.15 | 32.72 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 33.66 | 32.54 |
| AT1G14890.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 35.15 | 32.42 |
| Os04t0106000-01 | Rice | extracellular | 28.22 | 32.2 |
| AT1G70720.2 | Thale cress | plastid | 33.66 | 32.08 |
| AT5G51520.1 | Thale cress | extracellular | 32.18 | 31.86 |
| AT1G23205.1 | Thale cress | endoplasmic reticulum, vacuole | 32.18 | 31.71 |
| GSMUA_Achr5P12890_001 | Banana | endoplasmic reticulum | 28.22 | 31.32 |
| AT4G25250.1 | Thale cress | extracellular | 30.2 | 30.65 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 36.14 | 30.54 |
| Zm00001d024913_P001 | Maize | extracellular | 30.69 | 30.54 |
| EES11737 | Sorghum | extracellular | 31.68 | 29.91 |
| TraesCS2D01G035100.1 | Wheat | extracellular | 29.7 | 28.17 |
| TraesCS2A01G036100.1 | Wheat | extracellular | 29.21 | 27.83 |
| TraesCS2B01G049000.1 | Wheat | extracellular | 28.22 | 26.76 |
| AT3G62820.1 | Thale cress | extracellular | 25.25 | 26.29 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 26.73 | 25.96 |
| AT1G62760.1 | Thale cress | plastid | 37.13 | 24.04 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:836356 | UniProt:A0A178UCF3 | ProteinID:AED97599.1 | EMBL:AF386964 |
| ArrayExpress:AT5G62350 | EnsemblPlantsGene:AT5G62350 | RefSeq:AT5G62350 | TAIR:AT5G62350 | RefSeq:AT5G62350-TAIR-G | EnsemblPlants:AT5G62350.1 |
| TAIR:AT5G62350.1 | EMBL:AY072529 | ProteinID:BAA97199.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0004857 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib | RefSeq:NP_201041.1 |
| ProteinID:OAO90837.1 | PFAM:PF04043 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF31 | InterPro:Pectinesterase_inhib_dom | UniProt:Q9LVA4 |
| SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM | TIGRFAMs:TIGR01614 | UniParc:UPI00000A60D3 | SEG:seg |
Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA4]
Coordinates
chr5:+:25037191..25038424
Molecular Weight (calculated)
22180.6 Da
IEP (calculated)
9.426
GRAVY (calculated)
-0.177
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKQYLFVLL SISYLLSLEL TAATAASQTG ASKKAINFIQ SSCKTTTYPA LCVHSLSVYA NDIQTSPKRL AETAIAVTLS RAQSTKLFVS RLTRMKGLKK
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.