Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- plastid 2
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80124 | Canola | extracellular, vacuole | 72.12 | 72.82 |
| Bra004439.1-P | Field mustard | extracellular, vacuole | 72.12 | 72.82 |
| CDY53010 | Canola | extracellular, plasma membrane | 71.63 | 72.33 |
| Bra021439.1-P | Field mustard | extracellular, plastid | 69.71 | 71.43 |
| AT3G62820.1 | Thale cress | extracellular | 60.1 | 64.43 |
| PGSC0003DMT400067636 | Potato | cytosol | 37.5 | 44.57 |
| Solyc08g006690.1.1 | Tomato | nucleus | 39.9 | 42.78 |
| KRH68192 | Soybean | extracellular | 37.98 | 40.1 |
| VIT_07s0005g00480.t01 | Wine grape | extracellular | 37.02 | 39.29 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular | 35.58 | 37.37 |
| AT4G12390.1 | Thale cress | endoplasmic reticulum, plasma membrane | 29.33 | 29.61 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 27.88 | 28.43 |
| AT1G70720.2 | Thale cress | plastid | 28.37 | 27.83 |
| AT5G62350.1 | Thale cress | extracellular | 25.96 | 26.73 |
| AT1G23205.1 | Thale cress | endoplasmic reticulum, vacuole | 25.96 | 26.34 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 27.4 | 25.68 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 25.0 | 25.62 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 28.85 | 25.1 |
| AT3G47380.1 | Thale cress | extracellular | 24.04 | 24.75 |
| AT4G25250.1 | Thale cress | extracellular | 23.56 | 24.62 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 23.08 | 23.88 |
| AT1G14890.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 25.0 | 23.74 |
| AT5G51520.1 | Thale cress | extracellular | 22.6 | 23.04 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 21.63 | 21.53 |
| AT1G62760.1 | Thale cress | plastid | 29.33 | 19.55 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:819380 | ProteinID:AAC63623.1 | ProteinID:AAM14850.1 | ProteinID:AEC10874.1 |
| ArrayExpress:AT2G47670 | EnsemblPlantsGene:AT2G47670 | RefSeq:AT2G47670 | TAIR:AT2G47670 | RefSeq:AT2G47670-TAIR-G | EnsemblPlants:AT2G47670.1 |
| TAIR:AT2G47670.1 | EMBL:AY086547 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0004857 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0010214 | GO:GO:0030234 |
| GO:GO:0043086 | GO:GO:0046910 | GO:GO:0048046 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib | RefSeq:NP_182289.1 |
| UniProt:O22244 | PFAM:PF04043 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0006048 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31080 | PANTHER:PTHR31080:SF16 | InterPro:Pectinesterase_inhib_dom | SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM |
| TIGRFAMs:TIGR01614 | UniParc:UPI0000048681 | SEG:seg | : | : | : |
Description
PMEI6Pectinesterase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:O22244]
Coordinates
chr2:-:19543921..19544910
Molecular Weight (calculated)
23179.0 Da
IEP (calculated)
9.854
GRAVY (calculated)
-0.022
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSSSSPIT FTLLLLLSLL VALNPNPSLA STGSNINTND IVTQYSTYVR NACNVTRYNR LCVRTLWPFA IVARNNTSKW ARASVAVTIT DTKRVLRLLL
101: KTQRSAVGES ERIALSDCRE LFVDSLDNLY KSLAVLRTLN ADEFQRQISD LATWLSAALT DDDTCLDGFE ETSSRTRTVR MVRRKATKCM RLCSNALALL
201: KKLAFDGL
101: KTQRSAVGES ERIALSDCRE LFVDSLDNLY KSLAVLRTLN ADEFQRQISD LATWLSAALT DDDTCLDGFE ETSSRTRTVR MVRRKATKCM RLCSNALALL
201: KKLAFDGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.