Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86708 Canola endoplasmic reticulum, vacuole 98.53 98.53
Bra029450.1-P Field mustard endoplasmic reticulum, extracellular 98.04 98.04
AT4G12390.1 Thale cress endoplasmic reticulum, plasma membrane 88.73 87.86
CDX97343 Canola endoplasmic reticulum, plasma membrane 87.75 86.89
CDY65618 Canola extracellular 87.75 86.89
CDY31841 Canola endoplasmic reticulum, extracellular 51.47 51.72
CDY46921 Canola endoplasmic reticulum, extracellular 51.47 51.72
CDY34685 Canola extracellular 51.96 51.46
VIT_00s0323g00050.t01 Wine grape extracellular 49.51 50.75
PGSC0003DMT400032573 Potato cytosol 26.96 50.0
KRH77402 Soybean extracellular 48.04 48.28
PGSC0003DMT400012073 Potato plastid 43.14 48.09
GSMUA_Achr11P... Banana extracellular 38.73 47.31
GSMUA_Achr1P00870_001 Banana extracellular 38.73 47.02
GSMUA_Achr8P12460_001 Banana extracellular 38.24 45.88
GSMUA_Achr3P26730_001 Banana extracellular 38.24 45.09
CDX92687 Canola extracellular 44.12 44.78
CDX89429 Canola extracellular 44.12 44.78
CDY11066 Canola extracellular 43.63 44.28
CDX86904 Canola extracellular 44.12 44.12
CDX94463 Canola extracellular 43.14 43.78
CDY00278 Canola extracellular 43.63 43.63
Solyc08g007450.1.1 Tomato extracellular 41.67 42.08
KRH04067 Soybean extracellular 43.14 41.31
CDY30715 Canola endoplasmic reticulum, extracellular 40.69 41.29
CDX99059 Canola extracellular 39.71 40.1
CDY70789 Canola extracellular 39.71 40.1
GSMUA_Achr5P12890_001 Banana endoplasmic reticulum 35.29 39.56
Os06t0711800-01 Rice extracellular 38.73 39.5
KXG20844 Sorghum extracellular 38.73 39.11
Os04t0106000-01 Rice extracellular 33.82 38.98
CDY46918 Canola endoplasmic reticulum, extracellular 38.73 38.73
CDY31839 Canola endoplasmic reticulum, extracellular 38.73 38.73
CDX87244 Canola plastid 37.75 38.69
KRH57338 Soybean endoplasmic reticulum, extracellular 40.69 38.6
TraesCS7D01G400200.1 Wheat extracellular, golgi 37.75 37.75
CDY16779 Canola plastid 36.76 37.69
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 36.76 37.5
Zm00001d024913_P001 Maize extracellular 37.25 37.44
TraesCS7B01G306500.1 Wheat extracellular, golgi 37.25 37.25
TraesCS7A01G406500.1 Wheat extracellular, golgi 37.25 37.07
CDY00279 Canola endoplasmic reticulum, extracellular 35.78 36.87
HORVU7Hr1G095080.4 Barley mitochondrion, plastid 36.76 36.76
Zm00001d014757_P001 Maize extracellular, vacuole 38.24 36.45
CDY52024 Canola endoplasmic reticulum, extracellular 35.78 36.32
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 35.78 36.32
Zm00001d036431_P001 Maize extracellular 39.22 36.2
CDY45298 Canola endoplasmic reticulum, extracellular 35.29 35.82
CDX92686 Canola cytosol, nucleus, plastid 15.2 35.63
EES11737 Sorghum extracellular 37.25 35.51
KXG20845 Sorghum extracellular 37.75 35.48
CDY03725 Canola extracellular 34.8 35.32
CDY53526 Canola endoplasmic reticulum, extracellular 30.39 34.07
CDY09473 Canola extracellular 33.33 33.66
CDY72606 Canola endoplasmic reticulum, extracellular 34.31 33.18
CDY23485 Canola endoplasmic reticulum, extracellular 33.82 32.86
CDY48809 Canola endoplasmic reticulum, vacuole 33.33 32.85
CDX68333 Canola extracellular 33.82 32.7
CDY72130 Canola extracellular 32.35 32.51
CDY09429 Canola endoplasmic reticulum, vacuole 32.84 32.37
TraesCS2A01G036100.1 Wheat extracellular 33.33 32.08
TraesCS2D01G035100.1 Wheat extracellular 33.33 31.92
CDX70942 Canola extracellular 31.86 31.86
CDY16561 Canola extracellular 30.39 31.63
TraesCS2B01G049000.1 Wheat extracellular 32.84 31.46
CDY04097 Canola endoplasmic reticulum, vacuole 31.37 31.37
CDY25774 Canola endoplasmic reticulum, plastid 34.31 31.25
CDY17457 Canola endoplasmic reticulum, vacuole 30.88 30.88
CDX76665 Canola plastid 28.43 30.69
CDX92436 Canola extracellular 30.39 30.54
CDY53010 Canola extracellular, plasma membrane 30.39 30.1
CDY21496 Canola endoplasmic reticulum, extracellular 30.39 29.95
CDY21423 Canola plastid 26.96 29.57
CDX83212 Canola endoplasmic reticulum, extracellular 29.9 29.47
CDY70934 Canola extracellular 29.41 29.41
CDY11065 Canola extracellular 28.43 29.15
CDX80124 Canola extracellular, vacuole 29.41 29.13
CDY63067 Canola extracellular 29.9 28.91
CDY36241 Canola endoplasmic reticulum, vacuole 29.9 28.77
CDY17658 Canola endoplasmic reticulum, vacuole 29.9 28.77
CDX91588 Canola extracellular 29.41 28.71
CDY11451 Canola extracellular, plastid 26.47 28.57
CDY00484 Canola extracellular 28.43 28.43
CDY68609 Canola extracellular 28.43 28.43
CDX89431 Canola extracellular 25.98 26.63
CDX89432 Canola extracellular 25.98 26.63
CDX94465 Canola extracellular 25.98 26.63
CDX94464 Canola extracellular 23.04 24.1
CDY11064 Canola extracellular 28.43 23.97
CDX89430 Canola extracellular 22.55 23.59
Protein Annotations
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11Gene3D:1.20.140.40MapMan:35.1GO:A0A078IS72UniProt:A0A078IS72
EnsemblPlants:CDY52309ProteinID:CDY52309ProteinID:CDY52309.1GO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234GO:GO:0043086EnsemblPlantsGene:GSBRNA2T00006729001InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043
PANTHER:PTHR31080PANTHER:PTHR31080:SF30MetaCyc:PWY-1081MetaCyc:PWY-7246MetaCyc:PWY-7248InterPro:Pectinesterase_inhib_dom
SMART:SM00856SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614UniPathway:UPA00545UniParc:UPI0004EBFF8A
SEG:seg:::::
Description
BnaCnng22160DBnaCnng22160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS72]
Coordinates
chrLK033077:+:48218..48832
Molecular Weight (calculated)
22891.1 Da
IEP (calculated)
10.770
GRAVY (calculated)
-0.040
Length
204 amino acids
Sequence
(BLAST)
001: MEPKLTHLCY CLLLFLPLLS QSTIANPSSS PNPNQSINFI VSSCRTTRYP KLCIKCLAAF ASRIHHNENR LARTALAVTL VRVRSTTVYV AKLTRARRIK
101: RREYLAVKDC VENLGDGLGM LVQSMREMKQ VGRSGRSRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AALH
Best Arabidopsis Sequence Match ( AT4G12390.1 )
(BLAST)
001: MEPKLTHLCY CLLLFLPLLC QSTIAKPSSS PNPSSSINFI VSSCRVTRYQ TLCVKCLAAF ADKIRRNENQ LAQTALAVTL VRVQSTTIYV GKLTKARRIK
101: RREYLAVKDC VENLGDGLEM LAQSMRELKQ VGRSGRDRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARHKS
Arabidopsis Description
PME1Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]
SUBAcon: [plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.