Factsheet for Bra029450.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86708	Canola	endoplasmic reticulum, vacuole	99.51	99.51
CDY52309	Canola	endoplasmic reticulum, vacuole	98.04	98.04
AT4G12390.1	Thale cress	endoplasmic reticulum, plasma membrane	88.73	87.86
Bra018475.1-P	Field mustard	endoplasmic reticulum, plasma membrane	87.25	86.41
VIT_00s0323g00050.t01	Wine grape	extracellular	49.51	50.75
Bra027019.1-P	Field mustard	endoplasmic reticulum, extracellular	50.49	50.74
PGSC0003DMT400032573	Potato	cytosol	26.47	49.09
KRH77402	Soybean	extracellular	48.53	48.77
PGSC0003DMT400012073	Potato	plastid	43.63	48.63
GSMUA_Achr11P...	Banana	extracellular	39.22	47.9
GSMUA_Achr1P00870_001	Banana	extracellular	39.22	47.62
GSMUA_Achr8P12460_001	Banana	extracellular	37.75	45.29
GSMUA_Achr3P26730_001	Banana	extracellular	37.75	44.51
Bra019179.1-P	Field mustard	extracellular	43.63	44.28
Bra013881.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	43.63	44.06
Bra010075.1-P	Field mustard	extracellular	43.63	43.63
Solyc08g007450.1.1	Tomato	extracellular	41.18	41.58
Bra029267.1-P	Field mustard	endoplasmic reticulum, extracellular	40.69	41.29
KRH04067	Soybean	extracellular	42.65	40.85
Bra006573.1-P	Field mustard	cytosol	19.61	40.82
Bra018157.1-P	Field mustard	plastid	36.76	40.54
GSMUA_Achr5P12890_001	Banana	endoplasmic reticulum	35.78	40.11
Os06t0711800-01	Rice	extracellular	38.73	39.5
Bra027020.1-P	Field mustard	endoplasmic reticulum, extracellular	39.22	39.22
KXG20844	Sorghum	extracellular	38.73	39.11
Os04t0106000-01	Rice	extracellular	33.82	38.98
KRH57338	Soybean	endoplasmic reticulum, extracellular	40.69	38.6
TraesCS7D01G400200.1	Wheat	extracellular, golgi	37.75	37.75
Zm00001d024913_P001	Maize	extracellular	37.25	37.44
Bra010076.1-P	Field mustard	endoplasmic reticulum, extracellular	36.27	37.37
TraesCS7B01G306500.1	Wheat	extracellular, golgi	37.25	37.25
Bra035897.1-P	Field mustard	plastid	36.27	37.19
TraesCS7A01G406500.1	Wheat	extracellular, golgi	37.25	37.07
HORVU7Hr1G095080.4	Barley	mitochondrion, plastid	36.76	36.76
Zm00001d014757_P001	Maize	extracellular, vacuole	38.24	36.45
Bra016678.1-P	Field mustard	endoplasmic reticulum, extracellular	35.78	36.32
Zm00001d036431_P001	Maize	extracellular	39.22	36.2
Bra026180.1-P	Field mustard	endoplasmic reticulum, extracellular	35.29	35.82
EES11737	Sorghum	extracellular	37.25	35.51
KXG20845	Sorghum	extracellular	37.75	35.48
Bra007939.1-P	Field mustard	extracellular	34.8	35.32
Bra012366.1-P	Field mustard	endoplasmic reticulum, vacuole	34.31	33.49
Bra003945.1-P	Field mustard	extracellular	33.82	32.7
TraesCS2A01G036100.1	Wheat	extracellular	33.82	32.55
Bra028261.1-P	Field mustard	cytosol, plastid	26.96	32.54
TraesCS2D01G035100.1	Wheat	extracellular	33.82	32.39
Bra013878.1-P	Field mustard	plastid	23.53	32.0
TraesCS2B01G049000.1	Wheat	extracellular	33.33	31.92
Bra026646.1-P	Field mustard	endoplasmic reticulum, vacuole	32.35	31.88
Bra002328.1-P	Field mustard	extracellular	31.37	31.53
Bra017437.1-P	Field mustard	endoplasmic reticulum, vacuole	30.88	30.88
Bra021439.1-P	Field mustard	extracellular, plastid	29.41	29.56
Bra024570.1-P	Field mustard	extracellular, vacuole	31.86	29.55
Bra000562.1-P	Field mustard	endoplasmic reticulum, extracellular	29.9	29.47
Bra013879.1-P	Field mustard	plastid	21.57	29.33
Bra019180.1-P	Field mustard	extracellular	28.43	29.15
Bra004439.1-P	Field mustard	extracellular, vacuole	29.41	29.13
Bra007704.1-P	Field mustard	extracellular, plastid	26.96	29.1
Bra037313.1-P	Field mustard	extracellular	29.9	28.91
Bra024869.1-P	Field mustard	endoplasmic reticulum, extracellular	29.41	28.3

Protein Annotations

EnsemblPlants:Bra029450.1	EnsemblPlants:Bra029450.1-P	EnsemblPlantsGene:Bra029450	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857
GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom
PANTHER:PTHR31080	PANTHER:PTHR31080:SF30	PFAM:PF04043	SEG:seg	SignalP:SignalP-noTM	SMART:SM00856
SUPFAM:SSF101148	TIGRFAMs:TIGR01614	UniParc:UPI000254278E	UniProt:M4EKY3	MapMan:35.1	:

Description

AT4G12390 (E=4e-077) PME1 | PME1 (PECTIN METHYLESTERASE INHIBITOR 1); enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor

Coordinates

chrA09:-:17987663..17988277

Molecular Weight (calculated)

22982.2 Da

IEP (calculated)

10.794

GRAVY (calculated)

-0.082

Length

204 amino acids

Sequence
(BLAST)

001: MEPKLTHLCY CLLLFLPLLS QYTIANPSSS PNPNQSINFI VSSCRTTRYP KLCIKCLAAF ASKIHHNENR LARTALAVTL VRVRSTTVYV AKLTRARRIK
101: RREYLAVKDC VENLGDGLGM LVQSMREMKK VGRSGRSRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARH

Best Arabidopsis Sequence Match ( AT4G12390.1 )
(BLAST)

001: MEPKLTHLCY CLLLFLPLLC QSTIAKPSSS PNPSSSINFI VSSCRVTRYQ TLCVKCLAAF ADKIRRNENQ LAQTALAVTL VRVQSTTIYV GKLTKARRIK
101: RREYLAVKDC VENLGDGLEM LAQSMRELKQ VGRSGRDRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARHKS

Arabidopsis Description

PME1Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.