Factsheet for Bra006573.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72130	Canola	extracellular	100.0	48.28
CDX70942	Canola	extracellular	97.96	47.06
Bra002328.1-P	Field mustard	extracellular	83.67	40.39
AT5G20740.2	Thale cress	endoplasmic reticulum, extracellular, plastid	87.76	35.98
VIT_11s0016g00590.t01	Wine grape	extracellular	59.18	30.85
PGSC0003DMT400035274	Potato	extracellular	59.18	30.69
Solyc07g042390.1.1	Tomato	nucleus	56.12	29.41
Solyc12g009270.1.1	Tomato	nucleus	48.98	25.67
KRH02570	Soybean	extracellular	53.06	25.37
KRH37544	Soybean	endoplasmic reticulum, extracellular	54.08	24.77
KRH12602	Soybean	extracellular	54.08	24.54
PGSC0003DMT400007510	Potato	extracellular	46.94	23.71
Bra019179.1-P	Field mustard	extracellular	47.96	23.38
Bra013881.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	43.88	21.29
Bra018157.1-P	Field mustard	plastid	38.78	20.54
Bra027020.1-P	Field mustard	endoplasmic reticulum, extracellular	41.84	20.1
Bra029450.1-P	Field mustard	endoplasmic reticulum, extracellular	40.82	19.61
Bra013878.1-P	Field mustard	plastid	28.57	18.67
Bra010075.1-P	Field mustard	extracellular	38.78	18.63
Bra018475.1-P	Field mustard	endoplasmic reticulum, plasma membrane	38.78	18.45
Bra016678.1-P	Field mustard	endoplasmic reticulum, extracellular	37.76	18.41
Bra028261.1-P	Field mustard	cytosol, plastid	31.63	18.34
Bra027019.1-P	Field mustard	endoplasmic reticulum, extracellular	37.76	18.23
Bra035897.1-P	Field mustard	plastid	36.73	18.09
Bra013879.1-P	Field mustard	plastid	27.55	18.0
Bra026180.1-P	Field mustard	endoplasmic reticulum, extracellular	36.73	17.91
Bra029267.1-P	Field mustard	endoplasmic reticulum, extracellular	36.73	17.91
Bra007704.1-P	Field mustard	extracellular, plastid	33.67	17.46
Bra012366.1-P	Field mustard	endoplasmic reticulum, vacuole	36.73	17.22
Bra010076.1-P	Field mustard	endoplasmic reticulum, extracellular	34.69	17.17
Bra004439.1-P	Field mustard	extracellular, vacuole	35.71	16.99
Bra007939.1-P	Field mustard	extracellular	33.67	16.42
Bra021439.1-P	Field mustard	extracellular, plastid	32.65	15.76
Bra019180.1-P	Field mustard	extracellular	31.63	15.58
Bra026646.1-P	Field mustard	endoplasmic reticulum, vacuole	32.65	15.46
Bra024570.1-P	Field mustard	extracellular, vacuole	34.69	15.45
Bra017437.1-P	Field mustard	endoplasmic reticulum, vacuole	31.63	15.2
Bra000562.1-P	Field mustard	endoplasmic reticulum, extracellular	31.63	14.98
Bra003945.1-P	Field mustard	extracellular	31.63	14.69
Bra037313.1-P	Field mustard	extracellular	30.61	14.22
Bra024869.1-P	Field mustard	endoplasmic reticulum, extracellular	21.43	9.91

Protein Annotations

EnsemblPlants:Bra006573.1	EnsemblPlants:Bra006573.1-P	EnsemblPlantsGene:Bra006573	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857
GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom
PANTHER:PTHR31080	PANTHER:PTHR31080:SF26	PFAM:PF04043	SUPFAM:SSF101148	TIGRFAMs:TIGR01614	UniParc:UPI0002540050
UniProt:M4CQT2	MapMan:35.1	:	:	:	:

Description

AT5G20740 (E=2e-045) | invertase/pectin methylesterase inhibitor family protein

Coordinates

chrA03:-:4107689..4107985

Molecular Weight (calculated)

10895.9 Da

IEP (calculated)

5.695

GRAVY (calculated)

-0.454

Length

98 amino acids

Sequence
(BLAST)

1: MIGDSVDELS RTLGALKHLR VSGGSVNEFR WQMSNAQTWA SAALTDDDTC LDGFQGIDGE IKSEVKEWMT KVARVTSNAL YMINQLDDKR GKPHVVRP

Best Arabidopsis Sequence Match ( AT5G20740.1 )
(BLAST)

001: MAPTQNLFLV AIAFAVIFTA STVHGRHNGA EDIVHSSCEH ASYPSLCVRT LSSYSGPTIT NRRDLAQAAI KISLSHAQSA AKKLAVVRDS VGKKKQEKAA
101: LVDCVEMIGD SVDELSRTLG VLKHLRVSGG SAKEFRWQMS NAQTWASAAL TDDDTCLDGF QGMDDGEIKT EVKQWMTKVA RVTSNALYMV NQLDETRGKP
201: HDVHL

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:TAIR;Acc:AT5G20740]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.