Factsheet for PGSC0003DMT400032573

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g007450.1.1	Tomato	extracellular	94.55	51.49
PGSC0003DMT400012073	Potato	plastid	56.36	33.88
VIT_00s0323g00050.t01	Wine grape	extracellular	54.55	30.15
KRH04067	Soybean	extracellular	55.45	28.64
KRH57338	Soybean	endoplasmic reticulum, extracellular	55.45	28.37
GSMUA_Achr3P26730_001	Banana	extracellular	44.55	28.32
GSMUA_Achr8P12460_001	Banana	extracellular	43.64	28.24
AT4G12390.1	Thale cress	endoplasmic reticulum, plasma membrane	50.91	27.18
CDY52309	Canola	endoplasmic reticulum, vacuole	50.0	26.96
GSMUA_Achr11P...	Banana	extracellular	40.91	26.95
GSMUA_Achr1P00870_001	Banana	extracellular	40.91	26.79
KRH77402	Soybean	extracellular	49.09	26.6
PGSC0003DMT400028031	Potato	extracellular	47.27	26.53
Bra029450.1-P	Field mustard	endoplasmic reticulum, extracellular	49.09	26.47
CDX86708	Canola	endoplasmic reticulum, vacuole	49.09	26.47
PGSC0003DMT400055550	Potato	extracellular	45.45	26.04
CDY46921	Canola	endoplasmic reticulum, extracellular	47.27	25.62
CDY31841	Canola	endoplasmic reticulum, extracellular	47.27	25.62
Bra027019.1-P	Field mustard	endoplasmic reticulum, extracellular	47.27	25.62
CDY65618	Canola	extracellular	47.27	25.24
Bra018475.1-P	Field mustard	endoplasmic reticulum, plasma membrane	47.27	25.24
CDX97343	Canola	endoplasmic reticulum, plasma membrane	47.27	25.24
AT1G62770.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	46.36	25.0
Os04t0106000-01	Rice	extracellular	40.0	24.86
CDY34685	Canola	extracellular	46.36	24.76
Os06t0711800-01	Rice	extracellular	42.73	23.5
HORVU7Hr1G095080.4	Barley	mitochondrion, plastid	42.73	23.04
TraesCS7D01G400200.1	Wheat	extracellular, golgi	42.73	23.04
TraesCS7B01G306500.1	Wheat	extracellular, golgi	42.73	23.04
TraesCS7A01G406500.1	Wheat	extracellular, golgi	42.73	22.93
GSMUA_Achr5P12890_001	Banana	endoplasmic reticulum	37.27	22.53
PGSC0003DMT400003231	Potato	mitochondrion	32.73	22.36
KXG20844	Sorghum	extracellular	40.91	22.28
PGSC0003DMT400066783	Potato	extracellular	40.0	21.36
Zm00001d014757_P001	Maize	extracellular, vacuole	40.91	21.03
Zm00001d036431_P001	Maize	extracellular	41.82	20.81
KXG20845	Sorghum	extracellular	40.91	20.74
PGSC0003DMT400067636	Potato	cytosol	31.82	20.0
Zm00001d024913_P001	Maize	extracellular	36.36	19.7
PGSC0003DMT400072092	Potato	endoplasmic reticulum, extracellular, vacuole	34.55	19.19
PGSC0003DMT400035274	Potato	extracellular	32.73	19.05
TraesCS2A01G036100.1	Wheat	extracellular	36.36	18.87
TraesCS2D01G035100.1	Wheat	extracellular	36.36	18.78
TraesCS2B01G049000.1	Wheat	extracellular	36.36	18.78
EES11737	Sorghum	extracellular	36.36	18.69
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	35.45	18.66
PGSC0003DMT400031363	Potato	plastid	33.64	18.41
PGSC0003DMT400049198	Potato	extracellular	34.55	18.1
PGSC0003DMT400031362	Potato	extracellular	32.73	17.73
PGSC0003DMT400031359	Potato	endoplasmic reticulum, extracellular	30.0	17.1
PGSC0003DMT400007510	Potato	extracellular	29.09	16.49
PGSC0003DMT400071010	Potato	extracellular	22.73	12.76
PGSC0003DMT400028038	Potato	endoplasmic reticulum, extracellular	21.82	12.44
PGSC0003DMT400028039	Potato	extracellular	25.45	8.28

Protein Annotations

EnsemblPlants:PGSC0003DMT400032573	EnsemblPlantsGene:PGSC0003DMG400012511	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom	PANTHER:PTHR31080
PANTHER:PTHR31080:SF30	PFAM:PF04043	PGSC:PGSC0003DMG400012511	SMART:SM00856	SUPFAM:SSF101148	TIGRFAMs:TIGR01614
UniParc:UPI0002951E6A	UniProt:M1AXN2	MapMan:35.1	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012511]

Coordinates

chr8:+:383146..383478

Molecular Weight (calculated)

12353.8 Da

IEP (calculated)

8.923

GRAVY (calculated)

-0.358

Length

110 amino acids

Sequence
(BLAST)

001: MRGLKPRELQ AVKDCSFNMN DCVHQLERSI PGLGQSGKLA SRRDEFTWHV SNVQTWISAA LTDQNTCLDM INNPSMDGKI KDSIRVRVFV ASQVTSNALA
101: LVYKFAEKHS

Best Arabidopsis Sequence Match ( AT5G62350.1 )
(BLAST)

001: MAKQYLFVLL SISYLLSLEL TAATAASQTG ASKKAINFIQ SSCKTTTYPA LCVHSLSVYA NDIQTSPKRL AETAIAVTLS RAQSTKLFVS RLTRMKGLKK
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.