Factsheet for VIT_00s0323g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	57.21	57.5
VIT_16s0022g00860.t01	Wine grape	extracellular	57.21	57.21
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	55.72	55.45
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	55.72	55.45
VIT_00s0323g00070.t01	Wine grape	endoplasmic reticulum, extracellular	52.74	51.96
VIT_16s0022g00890.t01	Wine grape	plastid	39.8	51.28
VIT_00s0323g00050.t01	Wine grape	extracellular	46.77	47.24
Bra027020.1-P	Field mustard	endoplasmic reticulum, extracellular	45.77	45.1
CDY46918	Canola	endoplasmic reticulum, extracellular	45.77	45.1
CDY31839	Canola	endoplasmic reticulum, extracellular	45.27	44.61
VIT_16s0022g00960.t01	Wine grape	extracellular, vacuole	43.28	43.94
GSMUA_Achr1P04190_001	Banana	extracellular	42.79	42.16
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	43.78	42.11
VIT_16s0022g00940.t01	Wine grape	plastid	41.79	39.81
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	40.8	37.79
VIT_01s0011g05410.t01	Wine grape	extracellular	38.81	37.68
VIT_11s0016g00590.t01	Wine grape	extracellular	33.83	36.17
VIT_01s0011g05390.t01	Wine grape	extracellular	36.82	34.26
VIT_07s0005g00480.t01	Wine grape	extracellular	30.35	31.12
TraesCS1D01G178200.1	Wheat	extracellular	31.34	29.3
Os10t0508700-01	Rice	extracellular	30.35	28.5
TraesCS1A01G180000.1	Wheat	extracellular	30.35	28.5
TraesCS1B01G200600.1	Wheat	extracellular	29.85	28.17
Zm00001d032495_P001	Maize	extracellular	30.35	27.85
AT1G62760.1	Thale cress	plastid	42.79	27.56
EER91394	Sorghum	extracellular, plasma membrane	29.85	26.91
EER91393	Sorghum	extracellular	31.84	26.78
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	30.35	26.75

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:100248802	wikigene:100248802	MapMan:35.1	ProteinID:CCB51766	ProteinID:CCB51766.1
UniProt:F6HHS0	EMBL:FN595760	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150	GO:GO:0009987
GO:GO:0030234	GO:GO:0043086	GO:GO:0046910	GO:GO:0071669	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib
EntrezGene:LOC100248802	wikigene:LOC100248802	PFAM:PF04043	PANTHER:PTHR31080	PANTHER:PTHR31080:SF8	InterPro:Pectinesterase_inhib_dom
SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGR:TC52038	TIGRFAMs:TIGR01614	UniParc:UPI0001982CD4
ArrayExpress:VIT_00s0323g00060	EnsemblPlantsGene:VIT_00s0323g00060	EnsemblPlants:VIT_00s0323g00060.t01	unigene:Vvi.7879	RefSeq:XP_002264799	RefSeq:XP_002264799.1
RefSeq:XP_019073908.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:23323724..23324614

Molecular Weight (calculated)

21620.6 Da

IEP (calculated)

7.919

GRAVY (calculated)

-0.160

Length

201 amino acids

Sequence
(BLAST)

001: MEGSSLSPPL TAFFILFFQF SACMSSSSAA HTNTDYIKTS CLATTYPHLC YDSLSIYANK IQTSPKRLAT TALSVASSSA RSTLVSMKQL SKTHGLKPRE
101: ASAMIDCVEE VADSVDELHK SIGEMGHAGG PDFEFRMGNI QTWVSAALTD EETCTDGFAG RAMNGNLKKT VQRHINKVAR LTSNALALVN KYASTHTPAS
201: P

Best Arabidopsis Sequence Match ( AT5G62360.1 )
(BLAST)

001: MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA3]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.