Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13780.1 | KRH14485 | AT1G06510.1 | 21798944 |
| AT5G13780.1 | KRH73638 | AT1G06510.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62924 | Soybean | endoplasmic reticulum | 95.26 | 97.31 |
| Solyc01g087900.2.1 | Tomato | nucleus | 85.26 | 85.71 |
| PGSC0003DMT400017443 | Potato | cytosol | 84.74 | 85.64 |
| VIT_13s0064g00020.t01 | Wine grape | cytosol | 87.37 | 85.13 |
| Bra008803.1-P | Field mustard | cytosol | 73.68 | 83.83 |
| AT5G13780.1 | Thale cress | cytosol | 83.68 | 82.81 |
| Bra023435.1-P | Field mustard | cytosol | 81.58 | 79.9 |
| KRH14495 | Soybean | extracellular | 26.32 | 74.63 |
| KRH67220 | Soybean | cytosol, extracellular | 11.58 | 39.29 |
| KRG95544 | Soybean | cytosol | 11.58 | 31.88 |
| KRH67218 | Soybean | cytosol | 18.95 | 30.77 |
Protein Annotations
| EntrezGene:100800073 | MapMan:18.2.1.1 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | EMBL:BT098091 | UniProt:C6TK86 |
| EnsemblPlantsGene:GLYMA_U017600 | InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006464 | GO:GO:0006475 |
| GO:GO:0008080 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0017198 |
| GO:GO:0018002 | GO:GO:0019538 | GO:GO:0022626 | GO:GO:0031415 | GO:GO:1990189 | GO:GO:1990190 |
| InterPro:IPR000182 | EnsemblPlants:KRG88982 | ProteinID:KRG88982 | ProteinID:KRG88982.1 | PFAM:PF00583 | PFscan:PS51186 |
| PANTHER:PTHR23091 | PANTHER:PTHR23091:SF282 | SUPFAM:SSF55729 | UniParc:UPI0001B16B0F | SEG:seg | : |
Description
hypothetical protein
Coordinates
chrscaffold_21:-:2934373..2935911
Molecular Weight (calculated)
21829.1 Da
IEP (calculated)
8.189
GRAVY (calculated)
-0.584
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MVCIRKATVK DLLAMQACNL FCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEETTDCHG HITSLAVLRT HRKLGLATKL MTAAQNAMEQ
101: VFGAEYVSLH VRKSNRAAFN LYTETLGYKI HDVEAKYYAD GEDAYDMRKQ LKGKQHHHHH HNHHHHHHHH HEHSGGCCSG EAKGNPAKAT
101: VFGAEYVSLH VRKSNRAAFN LYTETLGYKI HDVEAKYYAD GEDAYDMRKQ LKGKQHHHHH HNHHHHHHHH HEHSGGCCSG EAKGNPAKAT
001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK
Arabidopsis Description
NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.