Factsheet for VIT_13s0064g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_12s0028g00200.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13780.1	VIT_12s0028g00200.t01	AT1G06510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62924	Soybean	endoplasmic reticulum	86.15	90.32
Solyc01g087900.2.1	Tomato	nucleus	85.13	87.83
PGSC0003DMT400017443	Potato	cytosol	84.62	87.77
KRG88982	Soybean	cytosol	85.13	87.37
AT5G13780.1	Thale cress	cytosol	82.56	83.85
Bra008803.1-P	Field mustard	cytosol	71.79	83.83
Bra023435.1-P	Field mustard	cytosol	82.56	82.99
GSMUA_Achr5P03880_001	Banana	cytosol	70.77	81.18
Os04t0635800-03	Rice	cytosol	76.92	75.76
EES12930	Sorghum	cytosol	76.41	75.63
TraesCS2B01G559300.1	Wheat	cytosol	73.85	75.0
Zm00001d002156_P001	Maize	extracellular	74.87	74.11
HORVU2Hr1G116570.1	Barley	cytosol	73.85	73.85
HORVU2Hr1G116600.1	Barley	cytosol	73.85	73.85
HORVU2Hr1G116620.1	Barley	endoplasmic reticulum, golgi	73.85	73.85
HORVU2Hr1G116630.1	Barley	cytosol	73.85	73.85
TraesCS2A01G528900.1	Wheat	cytosol	73.85	73.47
TraesCS2D01G531800.1	Wheat	cytosol	73.85	73.47
GSMUA_Achr4P18170_001	Banana	cytosol	80.51	73.36
Zm00001d026391_P004	Maize	cytosol	72.82	72.08
KXG27210	Sorghum	cytosol, golgi	63.08	63.4
VIT_07s0151g01030.t01	Wine grape	cytosol	29.74	33.33
TraesCS2B01G156100.1	Wheat	cytosol	28.21	24.12
TraesCS7B01G106100.1	Wheat	cytosol	27.69	23.68
TraesCS6B01G203800.1	Wheat	cytosol	26.67	22.81

Protein Annotations

EntrezGene:100265457	wikigene:100265457	MapMan:18.2.1.1	Gene3D:3.40.630.30	UniProt:A5BAL6	EMBL:AM452409
InterPro:Acyl_CoA_acyltransferase	ProteinID:CAN61153	ProteinID:CAN61153.1	ProteinID:CCB49552	ProteinID:CCB49552.1	EMBL:FN595509
InterPro:GNAT_dom	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006464	GO:GO:0006475
GO:GO:0006950	GO:GO:0007275	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009414
GO:GO:0009628	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016740
GO:GO:0017198	GO:GO:0018002	GO:GO:0019538	GO:GO:0022626	GO:GO:0031415	GO:GO:1990189
GO:GO:1990190	InterPro:IPR000182	EntrezGene:LOC100265457	wikigene:LOC100265457	PFAM:PF00583	PFscan:PS51186
PANTHER:PTHR23091	PANTHER:PTHR23091:SF282	SUPFAM:SSF55729	TIGR:TC52462	UniParc:UPI000152055C	ArrayExpress:VIT_13s0064g00020
EnsemblPlantsGene:VIT_13s0064g00020	EnsemblPlants:VIT_13s0064g00020.t01	unigene:Vvi.3014	RefSeq:XP_002273592	RefSeq:XP_002273592.1	RefSeq:XP_019080129.1
RefSeq:XP_019080130.1	RefSeq:XP_019080131.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:+:21451021..21451855

Molecular Weight (calculated)

22165.6 Da

IEP (calculated)

7.515

GRAVY (calculated)

-0.496

Length

195 amino acids

Sequence
(BLAST)

001: MVCIRKATID DLLAMQACNL LCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESSECHG HITSLAVLRT HRKLGLATKL MTAAQNAMEQ
101: VFGAEYVSLH VRKSNRAAFN LYTETLGYKI HDVEAKYYAD GEDAYDMRKQ LKGKQVGHHH HHHHHHHHHH GGGCCGGEPK LVETKGEAKA EAKAE

Best Arabidopsis Sequence Match ( AT5G13780.1 )
(BLAST)

001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK

Arabidopsis Description

NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.