Factsheet for GSMUA_Achr4P18170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr7P17650_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13780.1	GSMUA_Achr7P17650_001	AT1G06510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03880_001	Banana	cytosol	68.22	85.88
Solyc01g087900.2.1	Tomato	nucleus	71.96	81.48
Bra008803.1-P	Field mustard	cytosol	63.55	81.44
PGSC0003DMT400017443	Potato	cytosol	71.5	81.38
TraesCS2B01G559300.1	Wheat	cytosol	72.43	80.73
VIT_13s0064g00020.t01	Wine grape	cytosol	73.36	80.51
Os04t0635800-03	Rice	cytosol	73.83	79.8
AT5G13780.1	Thale cress	cytosol	71.5	79.69
EES12930	Sorghum	cytosol	72.43	78.68
TraesCS2D01G531800.1	Wheat	cytosol	71.96	78.57
TraesCS2A01G528900.1	Wheat	cytosol	71.96	78.57
HORVU2Hr1G116570.1	Barley	cytosol	71.03	77.95
HORVU2Hr1G116600.1	Barley	cytosol	71.03	77.95
HORVU2Hr1G116620.1	Barley	endoplasmic reticulum, golgi	71.03	77.95
HORVU2Hr1G116630.1	Barley	cytosol	71.03	77.95
Bra023435.1-P	Field mustard	cytosol	70.56	77.84
Zm00001d002156_P001	Maize	extracellular	70.56	76.65
Zm00001d026391_P004	Maize	cytosol	70.56	76.65
KRH14495	Soybean	extracellular	21.03	67.16
KXG27210	Sorghum	cytosol, golgi	57.48	63.4
GSMUA_Achr8P31560_001	Banana	cytosol	26.64	32.76
TraesCS2B01G156100.1	Wheat	cytosol	28.04	26.32
TraesCS7B01G106100.1	Wheat	cytosol	27.57	25.88
TraesCS6B01G203800.1	Wheat	cytosol	26.64	25.0
GSMUA_Achr2P07830_001	Banana	cytosol, nucleus, plastid	26.64	17.76

Protein Annotations

EnsemblPlants:GSMUA_Achr4P18170_001	EnsemblPlants:GSMUA_Achr4T18170_001	EnsemblPlantsGene:GSMUA_Achr4G18170_001	Gene3D:3.40.630.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008080	GO:GO:0016740	InterPro:Acyl_CoA_acyltransferase	InterPro:GNAT_dom	InterPro:IPR000182	PANTHER:PTHR23091
PANTHER:PTHR23091:SF282	PFAM:PF00583	PFscan:PS51186	SEG:seg	SUPFAM:SSF55729	UniParc:UPI000295AABC
UniProt:M0SPY0	MapMan:18.2.1.1	:	:	:	:

Description

acetyltransferase, GNAT family, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G18170_001]

Coordinates

chr4:+:18807110..18808020

Molecular Weight (calculated)

23393.6 Da

IEP (calculated)

7.371

GRAVY (calculated)

-0.351

Length

214 amino acids

Sequence
(BLAST)

001: MVCIRQATVE DLLAMQACNL LCLPENYQMK YYLYHILSWP QLLFVAEDYG GQIVGYVLAK MEEDTSEPCH GHITSLAVLR THRKLGLATK LMTAAQNAME
101: SVFGAEYVSL HVRRSNRAAF TLYTSTLGYR IHDVEAKYYA DGEDAYDMRK QLKGRPHGHS HGHSHGHGQA HHHHHHHHHG GGCCSGEVKP PAAAGAYASA
201: SSASASASAS ASGE

Best Arabidopsis Sequence Match ( AT5G13780.1 )
(BLAST)

001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK

Arabidopsis Description

NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.