Factsheet for Zm00001d026391_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d043764_P005

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13780.1	Zm00001d043764_P005	AT1G06510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002156_P001	Maize	extracellular	94.42	94.42
EES12930	Sorghum	cytosol	90.86	90.86
TraesCS2B01G559300.1	Wheat	cytosol	88.32	90.62
Os04t0635800-03	Rice	cytosol	90.86	90.4
TraesCS2D01G531800.1	Wheat	cytosol	89.34	89.8
TraesCS2A01G528900.1	Wheat	cytosol	89.34	89.8
HORVU2Hr1G116570.1	Barley	cytosol	87.82	88.72
HORVU2Hr1G116600.1	Barley	cytosol	87.82	88.72
HORVU2Hr1G116620.1	Barley	endoplasmic reticulum, golgi	87.82	88.72
HORVU2Hr1G116630.1	Barley	cytosol	87.82	88.72
GSMUA_Achr5P03880_001	Banana	cytosol	67.51	78.24
Bra008803.1-P	Field mustard	cytosol	63.96	75.45
Bra023435.1-P	Field mustard	cytosol	74.11	75.26
Solyc01g087900.2.1	Tomato	nucleus	70.56	73.55
AT5G13780.1	Thale cress	cytosol	71.57	73.44
PGSC0003DMT400017443	Potato	cytosol	70.05	73.4
VIT_13s0064g00020.t01	Wine grape	cytosol	72.08	72.82
KXG27210	Sorghum	cytosol, golgi	70.56	71.65
GSMUA_Achr4P18170_001	Banana	cytosol	76.65	70.56
KRH14495	Soybean	extracellular	20.81	61.19
Zm00001d033620_P001	Maize	extracellular	27.41	31.4

Protein Annotations

EntrezGene:100272537	MapMan:18.2.1.1	Gene3D:3.40.630.30	ProteinID:AQK46461.1	ProteinID:AQK46462.1	ProteinID:AQK46464.1
InterPro:Acyl_CoA_acyltransferase	UniProt:B4FD75	EMBL:BT035063	EMBL:BT038907	InterPro:GNAT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008080	GO:GO:0016740	GO:GO:0016746	InterPro:IPR000182	EMBL:KJ727626
PFAM:PF00583	PFscan:PS51186	PANTHER:PTHR23091	PANTHER:PTHR23091:SF282	SUPFAM:SSF55729	UniParc:UPI00017B6692
EnsemblPlantsGene:Zm00001d026391	EnsemblPlants:Zm00001d026391_P004	EnsemblPlants:Zm00001d026391_T004	SEG:seg	:	:

Description

GNAT-transcription factor 43Acyl-CoA N-acyltransferases (NAT) superfamily protein

Coordinates

chr10:-:144991969..144994560

Molecular Weight (calculated)

21969.3 Da

IEP (calculated)

7.384

GRAVY (calculated)

-0.342

Length

197 amino acids

Sequence
(BLAST)

001: MVCIRQATIE DLLAMQACNL MCLPENYQMK YYFYHMLSWP QLLFVAEDYG GSIVGYVLAK MEEDPSEPCH GHITSLAVLR SHRKLGLATK LMSAAQAAMD
101: QVFGAEYVSL HVRRSNRAAF NLYTSTLGYQ IQDIEAKYYA DGEDAFDMRK LLRQPQPKKH HHHHHHGPGG CCSHDAPVAA TGSSPQSSGS PDKKAIT

Best Arabidopsis Sequence Match ( AT5G13780.1 )
(BLAST)

001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK

Arabidopsis Description

NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.