Factsheet for Zm00001d033620_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67220	Soybean	cytosol, extracellular	28.49	87.5
EER91035	Sorghum	cytosol	84.88	83.91
KRG95544	Soybean	cytosol	33.14	82.61
Os03t0699400-01	Rice	cytosol	83.14	82.18
TraesCS4D01G034900.1	Wheat	cytosol	82.56	81.61
TraesCS4A01G276200.1	Wheat	cytosol	82.56	81.61
VIT_07s0151g01030.t01	Wine grape	cytosol	76.16	75.29
CDY18154	Canola	cytosol	75.58	74.71
GSMUA_Achr8P31560_001	Banana	cytosol	75.58	74.71
AT1G03150.1	Thale cress	cytosol	75.0	74.14
Solyc06g065230.2.1	Tomato	cytosol	75.0	74.14
PGSC0003DMT400067067	Potato	cytosol	75.0	74.14
CDY15451	Canola	cytosol	74.42	73.56
HORVU4Hr1G005940.1	Barley	cytosol	81.98	68.78
KRH67218	Soybean	cytosol	45.93	67.52
Bra030521.1-P	Field mustard	cytosol	45.35	66.67
CDX89909	Canola	cytosol	75.58	46.59
Bra033377.1-P	Field mustard	cytosol	75.58	45.94
GSMUA_Achr2P07830_001	Banana	cytosol, nucleus, plastid	76.16	40.81
CDX86690	Canola	endoplasmic reticulum, extracellular	22.09	37.25
Zm00001d002156_P001	Maize	extracellular	33.14	28.93
Zm00001d026391_P004	Maize	cytosol	31.4	27.41

Protein Annotations

EnsemblPlants:Zm00001d033620_P001	EnsemblPlants:Zm00001d033620_T001	EnsemblPlantsGene:Zm00001d033620	Gene3D:3.40.630.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008080	GO:GO:0016740	InterPro:Acyl_CoA_acyltransferase	InterPro:GNAT_dom	InterPro:IPR000182	ncoils:Coil
PANTHER:PTHR23091	PANTHER:PTHR23091:SF71	PFAM:PF00583	PFscan:PS51186	ProteinID:ONM08078.1	SEG:seg
SUPFAM:SSF55729	UniParc:UPI00084257AE	UniProt:A0A1D6L0I5	MapMan:18.2.2.1	:	:

Description

silencing gene B 102 silencing gene B 102

Coordinates

chr1:-:269012384..269014829

Molecular Weight (calculated)

19922.1 Da

IEP (calculated)

9.194

GRAVY (calculated)

-0.208

Length

172 amino acids

Sequence
(BLAST)

001: MTTIRRFCCD DLLRFASVNL DHLTETFNMS FYMTYLARWP DYFHAAVSPG GRVMGYIMGK VEGQGESWHG HVTAVSVASE FRRQKLAKKL MNLLEEISDK
101: MDKAYFVDLF VRASNMPAIR MYEKLGYVVY RRVLRYYSGE EDGLGKRLQH TYSKSVTTSV LEYLSSTSLF LN

Best Arabidopsis Sequence Match ( AT1G03150.1 )
(BLAST)

001: MTTIRRFSCN DLLRFTSVNL DHLTETFNMS FYMTYLARWP DYFHVAEGPG NRVMGYIMGK VEGQGESWHG HVTAVTVSPE YRRQQLAKKL MNLLEDISDK
101: IDKAYFVDLF VRASNTPAIK MYEKLGYIIY RRVLRYYSGE EDGLDMRKAL SRDVEKKSVI PLKRPITPDE LEYD

Arabidopsis Description

NAA20N-terminal acetyltransferase B complex catalytic subunit NAA20 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.