CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
extracellular 2
cytosol 2
nucleus 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G034900.1	Wheat	cytosol	97.13	97.13
TraesCS4A01G276200.1	Wheat	cytosol	97.13	97.13
Os03t0699400-01	Rice	cytosol	97.13	97.13
VIT_07s0151g01030.t01	Wine grape	cytosol	89.66	89.66
CDY18154	Canola	cytosol	89.08	89.08
KRH67218	Soybean	cytosol	59.77	88.89
AT1G03150.1	Thale cress	cytosol	88.51	88.51
Solyc06g065230.2.1	Tomato	cytosol	88.51	88.51
GSMUA_Achr8P31560_001	Banana	cytosol	88.51	88.51
PGSC0003DMT400067067	Potato	cytosol	88.51	88.51
Bra030521.1-P	Field mustard	cytosol	59.2	88.03
CDY15451	Canola	cytosol	87.93	87.93
KRH67220	Soybean	cytosol, extracellular	28.16	87.5
Zm00001d033620_P001	Maize	extracellular	83.91	84.88
KRG95544	Soybean	cytosol	32.76	82.61
HORVU4Hr1G005940.1	Barley	cytosol	96.55	81.95
CDX86690	Canola	endoplasmic reticulum, extracellular	35.06	59.8
CDX89909	Canola	cytosol	89.08	55.56
Bra033377.1-P	Field mustard	cytosol	89.08	54.77
GSMUA_Achr2P07830_001	Banana	cytosol, nucleus, plastid	89.66	48.6
EES12930	Sorghum	cytosol	35.06	30.96
KXG27210	Sorghum	cytosol, golgi	30.46	27.32

Protein Annotations

MapMan:18.2.2.1	Gene3D:3.40.630.30	EntrezGene:8066028	InterPro:Acyl_CoA_acyltransferase	UniProt:C5WNV1	ncoils:Coil
EnsemblPlants:EER91035	ProteinID:EER91035	ProteinID:EER91035.1	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004596	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0017196
GO:GO:0019538	GO:GO:0031416	InterPro:IPR000182	PFAM:PF00583	PFscan:PS51186	PANTHER:PTHR23091
PANTHER:PTHR23091:SF71	EnsemblPlantsGene:SORBI_3001G126200	SUPFAM:SSF55729	unigene:Sbi.17394	UniParc:UPI0001A825DD	RefSeq:XP_002464037.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:9932840..9935364

Molecular Weight (calculated)

20317.6 Da

IEP (calculated)

8.181

GRAVY (calculated)

-0.346

Length

174 amino acids

Sequence
(BLAST)

001: MTTIRRFCCD DLLRFASVNL DHLTETFNMS FYMTYLARWP DYFHAAVNPG GRVMGYIMGK VEGQGESWHG HVTAVSVASE FRRQKLAKKL MNLLEEISDK
101: MDKAYFVDLF VRASNMPAIR MYEKLGYVVY RRVLRYYSGE EDGLDMRKAL SQDVEKKSII PLKRPITPDE LEYD

Best Arabidopsis Sequence Match ( AT1G03150.1 )
(BLAST)

001: MTTIRRFSCN DLLRFTSVNL DHLTETFNMS FYMTYLARWP DYFHVAEGPG NRVMGYIMGK VEGQGESWHG HVTAVTVSPE YRRQQLAKKL MNLLEDISDK
101: IDKAYFVDLF VRASNTPAIK MYEKLGYIIY RRVLRYYSGE EDGLDMRKAL SRDVEKKSVI PLKRPITPDE LEYD

Arabidopsis Description

NAA20N-terminal acetyltransferase B complex catalytic subunit NAA20 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.