Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67218 | Soybean | cytosol | 45.1 | 39.32 |
| CDY15451 | Canola | cytosol | 64.71 | 37.93 |
| CDY18154 | Canola | cytosol | 64.71 | 37.93 |
| GSMUA_Achr8P31560_001 | Banana | cytosol | 63.73 | 37.36 |
| TraesCS4A01G276200.1 | Wheat | cytosol | 60.78 | 35.63 |
| TraesCS4D01G034900.1 | Wheat | cytosol | 60.78 | 35.63 |
| EER91035 | Sorghum | cytosol | 59.8 | 35.06 |
| PGSC0003DMT400067067 | Potato | cytosol | 59.8 | 35.06 |
| Os03t0699400-01 | Rice | cytosol | 58.82 | 34.48 |
| Solyc06g065230.2.1 | Tomato | cytosol | 58.82 | 34.48 |
| HORVU4Hr1G005940.1 | Barley | cytosol | 59.8 | 29.76 |
| KRH67220 | Soybean | cytosol, extracellular | 15.69 | 28.57 |
| CDX89909 | Canola | cytosol | 64.71 | 23.66 |
| Zm00001d033620_P001 | Maize | extracellular | 37.25 | 22.09 |
| GSMUA_Achr2P07830_001 | Banana | cytosol, nucleus, plastid | 63.73 | 20.25 |
| KRG95544 | Soybean | cytosol | 11.76 | 17.39 |
Protein Annotations
| EnsemblPlants:CDX86690 | EnsemblPlantsGene:GSBRNA2T00145374001 | Gene3D:3.40.630.30 | GO:A0A078DBT5 | PANTHER:PTHR23091 | PANTHER:PTHR23091:SF71 |
| ProteinID:CDX86690 | ProteinID:CDX86690.1 | TMHMM:TMhelix | UniParc:UPI0004EEA237 | MapMan:35.1 | : |
Description
BnaC08g00130D
Coordinates
chrLK031846:-:1684887..1685282
Molecular Weight (calculated)
12435.3 Da
IEP (calculated)
9.912
GRAVY (calculated)
-0.220
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFYMTYLAR WPDYFPVFFI FWQLGYIIYR RVLRYYSGEE DGLDMRKALS RDVDKKSVIP LKRPITPPDE LEYDSVSKMT MSLCFRHVFV FTLRKKIPHT
101: KF
101: KF
001: MTTIRRFSCN DLLRFTSVNL DHLTETFNMS FYMTYLARWP DYFHVAEGPG NRVMGYIMGK VEGQGESWHG HVTAVTVSPE YRRQQLAKKL MNLLEDISDK
101: IDKAYFVDLF VRASNTPAIK MYEKLGYIIY RRVLRYYSGE EDGLDMRKAL SRDVEKKSVI PLKRPITPDE LEYD
101: IDKAYFVDLF VRASNTPAIK MYEKLGYIIY RRVLRYYSGE EDGLDMRKAL SRDVEKKSVI PLKRPITPDE LEYD
Arabidopsis Description
NAA20N-terminal acetyltransferase B complex catalytic subunit NAA20 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.