Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91035 | Sorghum | cytosol | 97.13 | 97.13 |
| TraesCS4D01G034900.1 | Wheat | cytosol | 95.4 | 95.4 |
| TraesCS4A01G276200.1 | Wheat | cytosol | 95.4 | 95.4 |
| KRH67218 | Soybean | cytosol | 59.77 | 88.89 |
| VIT_07s0151g01030.t01 | Wine grape | cytosol | 88.51 | 88.51 |
| CDY18154 | Canola | cytosol | 88.51 | 88.51 |
| Bra030521.1-P | Field mustard | cytosol | 59.2 | 88.03 |
| AT1G03150.1 | Thale cress | cytosol | 87.93 | 87.93 |
| Solyc06g065230.2.1 | Tomato | cytosol | 87.93 | 87.93 |
| PGSC0003DMT400067067 | Potato | cytosol | 87.93 | 87.93 |
| CDY15451 | Canola | cytosol | 87.36 | 87.36 |
| GSMUA_Achr8P31560_001 | Banana | cytosol | 86.78 | 86.78 |
| KRH67220 | Soybean | cytosol, extracellular | 27.01 | 83.93 |
| Zm00001d033620_P001 | Maize | extracellular | 82.18 | 83.14 |
| HORVU4Hr1G005940.1 | Barley | cytosol | 95.98 | 81.46 |
| KRG95544 | Soybean | cytosol | 32.18 | 81.16 |
| CDX86690 | Canola | endoplasmic reticulum, extracellular | 34.48 | 58.82 |
| CDX89909 | Canola | cytosol | 88.51 | 55.2 |
| Bra033377.1-P | Field mustard | cytosol | 88.51 | 54.42 |
| GSMUA_Achr2P07830_001 | Banana | cytosol, nucleus, plastid | 87.93 | 47.66 |
| Os04t0635800-03 | Rice | cytosol | 34.48 | 30.3 |
Protein Annotations
| MapMan:18.2.2.1 | Gene3D:3.40.630.30 | EntrezGene:4333816 | ProteinID:AAO38448.1 | ProteinID:ABF98379.1 | EMBL:AK069110 |
| InterPro:Acyl_CoA_acyltransferase | ProteinID:BAF12902.1 | ProteinID:BAS85905.1 | ncoils:Coil | ProteinID:EAZ28256.1 | InterPro:GNAT_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004596 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008080 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0017196 | GO:GO:0019538 | GO:GO:0031416 | InterPro:IPR000182 | EnsemblPlantsGene:Os03g0699400 |
| EnsemblPlants:Os03t0699400-01 | PFAM:PF00583 | PFscan:PS51186 | PANTHER:PTHR23091 | PANTHER:PTHR23091:SF71 | UniProt:Q851S9 |
| SUPFAM:SSF55729 | UniParc:UPI00000027D8 | RefSeq:XP_015631173.1 | SEG:seg | : | : |
Description
Silencing group B protein. (Os03t0699400-01)
Coordinates
chr3:-:28039420..28042378
Molecular Weight (calculated)
20396.7 Da
IEP (calculated)
7.560
GRAVY (calculated)
-0.374
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTIRRFCCD DLLRFSSVNL DHLTETFNMS FYMTYMARWP DYFHAAVSPG DRVMGYIMGK VEGQGESWHG HVTAVSVATE FRRQKLAKKL MNLLEEISDK
101: MDKAYFVDLF VRASNMPAIR MYEKLGYVVY RRVLRYYSGE EDGLDMRKAL SQDVEKKSII PLKRPITPDE LEYD
101: MDKAYFVDLF VRASNMPAIR MYEKLGYVVY RRVLRYYSGE EDGLDMRKAL SQDVEKKSII PLKRPITPDE LEYD
001: MTTIRRFSCN DLLRFTSVNL DHLTETFNMS FYMTYLARWP DYFHVAEGPG NRVMGYIMGK VEGQGESWHG HVTAVTVSPE YRRQQLAKKL MNLLEDISDK
101: IDKAYFVDLF VRASNTPAIK MYEKLGYIIY RRVLRYYSGE EDGLDMRKAL SRDVEKKSVI PLKRPITPDE LEYD
101: IDKAYFVDLF VRASNTPAIK MYEKLGYIIY RRVLRYYSGE EDGLDMRKAL SRDVEKKSVI PLKRPITPDE LEYD
Arabidopsis Description
NAA20N-terminal acetyltransferase B complex catalytic subunit NAA20 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.