CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG33191

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13780.1	KXG33191	AT1G06510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002156_P001	Maize	extracellular	93.91	93.91
Os04t0635800-03	Rice	cytosol	92.89	92.42
TraesCS2B01G559300.1	Wheat	cytosol	89.34	91.67
Zm00001d026391_P004	Maize	cytosol	90.86	90.86
TraesCS2D01G531800.1	Wheat	cytosol	90.36	90.82
TraesCS2A01G528900.1	Wheat	cytosol	90.36	90.82
HORVU2Hr1G116570.1	Barley	cytosol	89.85	90.77
HORVU2Hr1G116600.1	Barley	cytosol	89.85	90.77
HORVU2Hr1G116620.1	Barley	endoplasmic reticulum, golgi	89.85	90.77
HORVU2Hr1G116630.1	Barley	cytosol	89.85	90.77
GSMUA_Achr5P03880_001	Banana	cytosol	69.54	80.59
Bra008803.1-P	Field mustard	cytosol	67.01	79.04
Bra023435.1-P	Field mustard	cytosol	77.16	78.35
AT5G13780.1	Thale cress	cytosol	75.13	77.08
VIT_13s0064g00020.t01	Wine grape	cytosol	75.63	76.41
Solyc01g087900.2.1	Tomato	nucleus	72.08	75.13
PGSC0003DMT400017443	Potato	cytosol	71.57	75.0
KXG27210	Sorghum	cytosol, golgi	71.57	72.68
GSMUA_Achr4P18170_001	Banana	cytosol	78.68	72.43
KRH14495	Soybean	extracellular	21.83	64.18
EER91035	Sorghum	cytosol	30.96	35.06

Protein Annotations

MapMan:18.2.1.1	Gene3D:3.40.630.30	EntrezGene:8068442	InterPro:Acyl_CoA_acyltransferase	UniProt:C5YGQ9	EnsemblPlants:EES12930
ProteinID:EES12930	ProteinID:EES12930.1	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006464
GO:GO:0006475	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0017198	GO:GO:0018002	GO:GO:0019538	GO:GO:0022626	GO:GO:0031415	GO:GO:1990189
GO:GO:1990190	InterPro:IPR000182	PFAM:PF00583	PFscan:PS51186	PANTHER:PTHR23091	PANTHER:PTHR23091:SF282
EnsemblPlantsGene:SORBI_3006G231500	SUPFAM:SSF55729	unigene:Sbi.5903	UniParc:UPI0001A877B4	RefSeq:XP_002448602.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:57449395..57452200

Molecular Weight (calculated)

22092.3 Da

IEP (calculated)

7.691

GRAVY (calculated)

-0.477

Length

197 amino acids

Sequence
(BLAST)

001: MVCIRQATID DLLAMQACNL MCLPENYQMK YYLYHMLSWP QLLFVAEDYG GRIVGYVLAK MEEDPSEPCH GHITSLAVLR SHRKLGLATK LMSAAQAAMD
101: QVFGAEYVSL HVRRSNRAAF NLYTSTLGYQ IHDIEAKYYA DGEDAYDMRK PLRQPQPKKH HHHHHHHHGP GGCCSHDAPA AATGSQSSSS PDKKANT

Best Arabidopsis Sequence Match ( AT5G13780.1 )
(BLAST)

001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK

Arabidopsis Description

NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.