CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG33191

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13780.1	KXG33191	AT1G06510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002156_P001	Maize	extracellular	73.71	72.59
TraesCS2B01G559300.1	Wheat	cytosol	71.65	72.4
HORVU2Hr1G116570.1	Barley	cytosol	72.16	71.79
HORVU2Hr1G116600.1	Barley	cytosol	72.16	71.79
HORVU2Hr1G116620.1	Barley	endoplasmic reticulum, golgi	72.16	71.79
HORVU2Hr1G116630.1	Barley	cytosol	72.16	71.79
EES12930	Sorghum	cytosol	72.68	71.57
Os04t0635800-03	Rice	cytosol	72.68	71.21
TraesCS2D01G531800.1	Wheat	cytosol	71.65	70.92
TraesCS2A01G528900.1	Wheat	cytosol	71.65	70.92
Zm00001d026391_P004	Maize	cytosol	71.65	70.56
GSMUA_Achr5P03880_001	Banana	cytosol	59.79	68.24
Bra008803.1-P	Field mustard	cytosol	56.7	65.87
VIT_13s0064g00020.t01	Wine grape	cytosol	63.4	63.08
Bra023435.1-P	Field mustard	cytosol	61.86	61.86
AT5G13780.1	Thale cress	cytosol	60.82	61.46
Solyc01g087900.2.1	Tomato	nucleus	59.79	61.38
PGSC0003DMT400017443	Potato	cytosol	59.28	61.17
GSMUA_Achr4P18170_001	Banana	cytosol	63.4	57.48
KRH14495	Soybean	extracellular	19.59	56.72
EER91035	Sorghum	cytosol	27.32	30.46

Protein Annotations

EnsemblPlants:KXG27210	EnsemblPlantsGene:SORBI_3006G231600	Gene3D:3.40.630.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008080
GO:GO:0016740	InterPro:Acyl_CoA_acyltransferase	InterPro:GNAT_dom	InterPro:IPR000182	PANTHER:PTHR23091	PANTHER:PTHR23091:SF282
PFAM:PF00583	PFscan:PS51186	ProteinID:KXG27210	ProteinID:KXG27210.1	SEG:seg	SUPFAM:SSF55729
UniParc:UPI00081AD5CB	UniProt:A0A1B6PNG5	MapMan:18.2.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:57455019..57455629

Molecular Weight (calculated)

21949.8 Da

IEP (calculated)

8.301

GRAVY (calculated)

-0.184

Length

194 amino acids

Sequence
(BLAST)

001: MVCIRQATID DLLAMQSCNL MCLPENYQMN CYLYHMLSCP QLLFVAEDYG GRMPMEEDLS QPCHGHITSL AVLRSHRKLG LATKLMSAAQ AAMEQVFDAE
101: YVSLHVRQSN RAAVNLYTST VGYQIHGIEA QYYADGENAF GMRKPLRQPQ PKKHHHHHHA APVGAAPTTH LRRRLVLLLS LLVCRIRRLT LDGE

Best Arabidopsis Sequence Match ( AT5G13780.1 )
(BLAST)

001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK

Arabidopsis Description

NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.