Factsheet for TraesCS2A01G528900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G257600.1
TraesCS3B01G290400.1
TraesCS3D01G257600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13780.1	TraesCS3A01G257600.1	AT1G06510.1	21798944
AT5G13780.1	TraesCS3B01G290400.1	AT1G06510.1	21798944
AT5G13780.1	TraesCS3D01G257600.1	AT1G06510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G531800.1	Wheat	cytosol	100.0	100.0
TraesCS2B01G559300.1	Wheat	cytosol	97.45	99.48
HORVU2Hr1G116570.1	Barley	cytosol	97.45	97.95
HORVU2Hr1G116600.1	Barley	cytosol	97.45	97.95
HORVU2Hr1G116620.1	Barley	endoplasmic reticulum, golgi	97.45	97.95
HORVU2Hr1G116630.1	Barley	cytosol	97.45	97.95
EES12930	Sorghum	cytosol	90.82	90.36
Os04t0635800-03	Rice	cytosol	90.31	89.39
Zm00001d026391_P004	Maize	cytosol	89.8	89.34
Zm00001d002156_P001	Maize	extracellular	89.29	88.83
Bra008803.1-P	Field mustard	cytosol	66.84	78.44
GSMUA_Achr5P03880_001	Banana	cytosol	67.86	78.24
Bra023435.1-P	Field mustard	cytosol	76.53	77.32
PGSC0003DMT400017443	Potato	cytosol	72.45	75.53
AT5G13780.1	Thale cress	cytosol	73.98	75.52
Solyc01g087900.2.1	Tomato	nucleus	72.45	75.13
VIT_13s0064g00020.t01	Wine grape	cytosol	73.47	73.85
GSMUA_Achr4P18170_001	Banana	cytosol	78.57	71.96
KXG27210	Sorghum	cytosol, golgi	70.92	71.65
KRH14495	Soybean	extracellular	20.92	61.19
TraesCS4A01G276200.1	Wheat	cytosol	30.1	33.91

Protein Annotations

EnsemblPlants:TraesCS2A01G528900.1	EnsemblPlantsGene:TraesCS2A01G528900	Gene3D:3.40.630.30	InterPro:Acyl_CoA_acyltransferase	InterPro:GNAT_dom	InterPro:IPR000182
PANTHER:PTHR23091	PANTHER:PTHR23091:SF282	PFAM:PF00583	PFscan:PS51186	SEG:seg	SUPFAM:SSF55729
TIGR:cd04301	MapMan:18.2.1.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:747622999..747623589

Molecular Weight (calculated)

21790.1 Da

IEP (calculated)

7.384

GRAVY (calculated)

-0.320

Length

196 amino acids

Sequence
(BLAST)

001: MVCIRQATID DLLAMQACNL MCLPENYQMK YYFYHMLSWP QLLFVAEDYG GRIVGYVLAK MEEDPSEPCH GHITSLAVLR SHRKLGLATK LMSAAQAAMD
101: QVFGAEYVSL HVRRSNRAAF NLYTSTLGYQ IHDIEAKYYA DGEDAYDMRK MLRQPVPKKH HHHHHAGGGC CSHDAPAAAA AGSSPTSASP EKKADS

Best Arabidopsis Sequence Match ( AT5G13780.1 )
(BLAST)

001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK

Arabidopsis Description

NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.