Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G257600.1 | |
| TraesCS3B01G290400.1 | |
| TraesCS3D01G257600.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13780.1 | TraesCS3A01G257600.1 | AT1G06510.1 | 21798944 |
| AT5G13780.1 | TraesCS3B01G290400.1 | AT1G06510.1 | 21798944 |
| AT5G13780.1 | TraesCS3D01G257600.1 | AT1G06510.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G106100.1 | Wheat | cytosol | 97.81 | 97.81 |
| TraesCS2B01G156100.1 | Wheat | cytosol | 96.49 | 96.49 |
| TraesCS2B01G559300.1 | Wheat | cytosol | 33.77 | 40.1 |
| Bra023435.1-P | Field mustard | cytosol | 23.25 | 27.32 |
| PGSC0003DMT400017443 | Potato | cytosol | 22.37 | 27.13 |
| Solyc01g087900.2.1 | Tomato | nucleus | 22.37 | 26.98 |
| VIT_13s0064g00020.t01 | Wine grape | cytosol | 22.81 | 26.67 |
| GSMUA_Achr4P18170_001 | Banana | cytosol | 25.0 | 26.64 |
| GSMUA_Achr5P03880_001 | Banana | cytosol | 19.74 | 26.47 |
| AT5G13780.1 | Thale cress | cytosol | 21.49 | 25.52 |
| Bra008803.1-P | Field mustard | cytosol | 17.98 | 24.55 |
| KRH14495 | Soybean | extracellular | 0.44 | 1.49 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G203800.1 | EnsemblPlantsGene:TraesCS6B01G203800 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom | InterPro:IPR000182 |
| PANTHER:PTHR23091 | PANTHER:PTHR23091:SF4 | PFscan:PS51186 | SEG:seg | SUPFAM:SSF55729 | MapMan:35.1 |
Description
No Description!
Coordinates
chr6B:-:250792875..250793561
Molecular Weight (calculated)
25059.6 Da
IEP (calculated)
10.114
GRAVY (calculated)
-0.747
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQVFGAEYV FLHVHRSNRA GLNLYTSTLG YQIHDIEAKY YADSEDAYDM RKMLRQPVPK KHHRNHTGRG CCSHESPTAA AAGSSPTSPS PKKKADEREV
101: SNHCCQIWRA TEPPLQTDHV APVGHPPTRE GLRHHGMGTL LPATARWALR RRPDRGKWAA AGRGAYPPCS QREPRAEEAA RMSSAGSAGL GREACLAQVA
201: RLWTSKSGRI RGCWSGARLL DVRSMGGG
101: SNHCCQIWRA TEPPLQTDHV APVGHPPTRE GLRHHGMGTL LPATARWALR RRPDRGKWAA AGRGAYPPCS QREPRAEEAA RMSSAGSAGL GREACLAQVA
201: RLWTSKSGRI RGCWSGARLL DVRSMGGG
001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK
Arabidopsis Description
NAA10N-terminal acetyltransferase A complex catalytic subunit NAA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKI4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.