CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73614	Soybean	endoplasmic reticulum	76.51	59.07
KRH14517	Soybean	endoplasmic reticulum	76.51	59.07
KRG98977	Soybean	cytosol	59.04	54.44
KRH14516	Soybean	cytosol	44.58	54.41
VIT_12s0028g00920.t01	Wine grape	cytosol	69.88	53.95
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	68.07	52.31
KRH46010	Soybean	cytosol	66.87	51.39
KRH46009	Soybean	cytosol	64.46	49.77
KRG98976	Soybean	cytosol, endoplasmic reticulum, mitochondrion	63.25	48.84
KRG98975	Soybean	cytosol	54.82	48.15
CDY29636	Canola	cytosol	62.05	47.91
CDY23980	Canola	cytosol	62.05	47.91
AT2G30860.1	Thale cress	cytosol	62.05	47.91
CDX97788	Canola	cytosol	62.05	47.91
CDX84816	Canola	cytosol	62.05	47.91
Bra022815.1-P	Field mustard	cytosol	62.05	47.91
Bra021673.1-P	Field mustard	cytosol, mitochondrion	60.84	46.98
AT2G30870.1	Thale cress	endoplasmic reticulum, vacuole	59.64	46.05
Bra022816.1-P	Field mustard	endoplasmic reticulum	59.64	46.05
CDX84815	Canola	cytosol, endoplasmic reticulum	58.43	45.12
CDY23979	Canola	endoplasmic reticulum	58.43	45.12
KRH30892	Soybean	cytosol	53.61	41.78
KRG97999	Soybean	cytosol	53.61	41.78
KRH31902	Soybean	cytosol	43.37	33.03
KRH71551	Soybean	cytosol	41.57	31.36
KRH71552	Soybean	cytosol	35.54	27.06

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.5	Gene3D:3.40.30.10	EMBL:ACUP02001285	EnsemblPlantsGene:GLYMA_02G283800	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:K7KBA9	EnsemblPlants:KRH73613	ProteinID:KRH73613	ProteinID:KRH73613.1	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF15	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000296B0E4	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:46546637..46547423

Molecular Weight (calculated)

19510.6 Da

IEP (calculated)

7.058

GRAVY (calculated)

-0.244

Length

166 amino acids

Sequence
(BLAST)

001: MVVKVYGPSC ASTKRVLVCL VEKEIEFEDI PVDIFKVEQK NPEFLKLQFN FVSSLTESRA IMRYYAEKYR SQVVELLGKT IEERGVVEQW LEVEHTTFTH
101: QPTTLHSEAK LVRVLNIYEE RLSKTKYLAG DFFSLADMSH LPFLEYNVNK LEKAYLIKER KHVTAW

Best Arabidopsis Sequence Match ( AT2G30860.1 )
(BLAST)

001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA

Arabidopsis Description

GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.