Factsheet for VIT_12s0028g00930.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g00920.t01	Wine grape	cytosol	80.56	80.93
KRG98977	Soybean	cytosol	64.35	77.22
KRH46010	Soybean	cytosol	76.85	76.85
KRH73614	Soybean	endoplasmic reticulum	75.46	75.81
KRH14517	Soybean	endoplasmic reticulum	74.54	74.88
KRH46009	Soybean	cytosol	73.61	73.95
KRG98976	Soybean	cytosol, endoplasmic reticulum, mitochondrion	73.15	73.49
KRG98975	Soybean	cytosol	62.04	70.9
KRH14516	Soybean	cytosol	43.52	69.12
KRH73613	Soybean	cytosol	52.31	68.07
Bra022815.1-P	Field mustard	cytosol	67.13	67.44
CDX84816	Canola	cytosol	67.13	67.44
CDY23980	Canola	cytosol	67.13	67.44
CDY29636	Canola	cytosol	66.67	66.98
CDX97788	Canola	cytosol	66.67	66.98
Bra021673.1-P	Field mustard	cytosol, mitochondrion	65.74	66.05
AT2G30860.1	Thale cress	cytosol	65.74	66.05
Bra022816.1-P	Field mustard	endoplasmic reticulum	63.89	64.19
CDY23979	Canola	endoplasmic reticulum	63.43	63.72
CDX84815	Canola	cytosol, endoplasmic reticulum	63.43	63.72
AT2G30870.1	Thale cress	endoplasmic reticulum, vacuole	62.96	63.26
VIT_04s0079g00690.t01	Wine grape	mitochondrion	55.09	55.87
VIT_04s0079g00710.t01	Wine grape	cytosol	52.78	53.52
VIT_07s0104g01800.t01	Wine grape	cytosol	49.54	49.31
VIT_07s0104g01810.t01	Wine grape	cytosol	49.54	49.31
VIT_18s0001g00690.t01	Wine grape	cytosol	49.54	47.98
VIT_07s0005g00030.t01	Wine grape	cytosol	42.59	42.99
VIT_07s0005g00010.t01	Wine grape	cytosol	42.13	42.52
VIT_07s0104g01830.t01	Wine grape	cytosol	39.81	40.0
VIT_07s0104g01820.t01	Wine grape	cytosol	38.43	38.25

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100233043
wikigene:100233043	MapMan:18.8.1.5	Gene3D:3.40.30.10	MapMan:9.5.1.6.4	ProteinID:ABW34390	ProteinID:ABW34390.1
EMBL:AM433192	ProteinID:CAN75964	ProteinID:CAN75964.1	ProteinID:CBI22080	ProteinID:CBI22080.3	UniProt:E0CU14
EMBL:EU181422	EMBL:FN595235	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100233043
wikigene:LOC100233043	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900
PANTHER:PTHR43900:SF15	SUPFAM:SSF47616	SUPFAM:SSF52833	TIGR:TC53088	InterPro:Thioredoxin-like_sf	UniParc:UPI0001984360
ArrayExpress:VIT_12s0028g00930	EnsemblPlantsGene:VIT_12s0028g00930	EnsemblPlants:VIT_12s0028g00930.t01	unigene:Vvi.7684	RefSeq:XP_002283209	RefSeq:XP_002283209.1

Description

No Description!

Coordinates

chr12:-:1438591..1439943

Molecular Weight (calculated)

24913.0 Da

IEP (calculated)

5.032

GRAVY (calculated)

-0.231

Length

216 amino acids

Sequence
(BLAST)

001: MVVKVYGPAF ACPKRVLICL VEKEIEFETV PVDIIKGEHK DPEYLKLQPF GVVPVIQDGD YTLYESRAII RYYAEKYKSQ GTDLLGKTIE ERGTVEQWLE
101: VEAQNYHPPI YNLVLHVLFS DKMGFPADAK VIEESEKNLG KVLDIYEERL SKSKYLAGDF FSLADLSHIP FTNYLGAMGK MYLIKEREHV SAWWDDISSR
201: PSWKKVLELY PAPILE

Best Arabidopsis Sequence Match ( AT2G30860.1 )
(BLAST)

001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA

Arabidopsis Description

GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.