Factsheet for VIT_04s0079g00710.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0079g00690.t01	Wine grape	mitochondrion	75.59	75.59
KRH30892	Soybean	cytosol	67.14	67.14
KRG97999	Soybean	cytosol	66.67	66.67
Solyc02g081340.2.1	Tomato	cytosol, endoplasmic reticulum	60.09	55.65
PGSC0003DMT400043105	Potato	cytosol, endoplasmic reticulum	60.09	55.65
AT3G03190.1	Thale cress	cytosol	54.46	54.21
GSMUA_Achr4P11730_001	Banana	cytosol	55.87	53.85
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	52.58	53.33
Bra008570.1-P	Field mustard	cytosol	53.05	53.05
CDX69395	Canola	cytosol	53.05	53.05
CDY16947	Canola	cytosol	53.05	53.05
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	53.52	53.02
CDX85469	Canola	cytosol, mitochondrion	53.52	53.02
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	52.11	52.86
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	53.52	52.78
AT5G17220.1	Thale cress	cytosol	52.58	52.34
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	50.7	51.43
VIT_12s0028g00920.t01	Wine grape	cytosol	50.7	50.23
CDY02726	Canola	cytosol	50.23	50.0
VIT_18s0001g00690.t01	Wine grape	cytosol	48.83	46.64
VIT_07s0104g01800.t01	Wine grape	cytosol	45.54	44.7
VIT_07s0104g01810.t01	Wine grape	cytosol	45.54	44.7
VIT_07s0005g00010.t01	Wine grape	cytosol	40.85	40.65
VIT_07s0005g00030.t01	Wine grape	cytosol	40.38	40.19
VIT_07s0104g01820.t01	Wine grape	cytosol	38.03	37.33
VIT_07s0104g01830.t01	Wine grape	cytosol	36.62	36.28
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	51.64	32.16
GSMUA_Achr4P04940_001	Banana	cytosol	52.58	24.56

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100263347
wikigene:100263347	MapMan:18.8.1.5	Gene3D:3.40.30.10	EMBL:AM464192	ProteinID:CAN65818	ProteinID:CAN65818.1
ProteinID:CBI27364	ProteinID:CBI27364.3	UniProt:D7TA42	EMBL:FN595753	GO:GO:0003674	GO:GO:0003824
GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EntrezGene:LOC100263347	wikigene:LOC100263347	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF18	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0001985F4B	ArrayExpress:VIT_04s0079g00710	EnsemblPlantsGene:VIT_04s0079g00710	EnsemblPlants:VIT_04s0079g00710.t01	RefSeq:XP_002272053	RefSeq:XP_002272053.1

Description

No Description!

Coordinates

chr4:-:11587680..11589329

Molecular Weight (calculated)

24372.6 Da

IEP (calculated)

5.152

GRAVY (calculated)

-0.082

Length

213 amino acids

Sequence
(BLAST)

001: MVVKVYGAVM TACPQRVLAC LVEKGLEFEV VHVDLDFGEQ KRPEFLIRQP FGQVRVMEDG DFRLFDSRAI IRYIVAKYVD EGPNLVGRNL EERSLVDQWL
101: EVEENNLNPL IFTVVLQLVI LPRMGEKGDL TLVRNCEQKL DKVFDAYEQR LSKSSYLGGD SFTLADLSHL PGIRYLVNEV GIGHLITERK NVSAWWENIS
201: NMPAWKKVMN LAS

Best Arabidopsis Sequence Match ( AT3G03190.1 )
(BLAST)

001: MVVKVYGQIK AANPQRVLLC FLEKDIEFEV IHVDLDKLEQ KKPQHLLRQP FGQVPAIEDG YLKLFESRAI ARYYATKYAD QGTDLLGKTL EGRAIVDQWV
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY

Arabidopsis Description

GSTF11Glutathione S-transferase F11 [Source:UniProtKB/Swiss-Prot;Acc:Q96324]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.