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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, cytosol, plasma membrane

Predictor Summary:
  • plastid 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane, plastid
Any Predictor:cytosol, endoplasmic reticulum, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02726 Canola cytosol 61.4 98.13
CDX85469 Canola cytosol, mitochondrion 60.23 95.81
CDX69395 Canola cytosol 54.09 86.85
CDY16947 Canola cytosol 53.8 86.39
AT5G17220.1 Thale cress cytosol 51.75 82.71
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 40.94 66.67
CDY28744 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 40.35 65.71
VIT_04s0079g00690.t01 Wine grape mitochondrion 34.21 54.93
KRH30892 Soybean cytosol 33.92 54.46
KRG97999 Soybean cytosol 33.04 53.05
VIT_04s0079g00710.t01 Wine grape cytosol 32.16 51.64
GSMUA_Achr4P11730_001 Banana cytosol 30.99 47.96
CDY18015 Canola cytosol 28.07 45.07
CDX90933 Canola cytosol 27.78 44.6
CDX90934 Canola cytosol, mitochondrion 27.19 43.66
CDY18016 Canola cytosol, mitochondrion 26.9 43.19
CDY22058 Canola cytosol, mitochondrion 26.9 43.19
CDY53015 Canola cytosol 25.15 43.0
CDY50374 Canola cytosol, mitochondrion 26.32 42.25
Solyc02g081340.2.1 Tomato cytosol, endoplasmic reticulum 28.36 42.17
CDX97273 Canola cytosol, mitochondrion 26.02 41.78
CDY65569 Canola cytosol, mitochondrion 26.02 41.78
PGSC0003DMT400043105 Potato cytosol, endoplasmic reticulum 28.07 41.74
CDX97788 Canola cytosol 25.44 40.47
CDY29636 Canola cytosol 25.44 40.47
CDX84815 Canola cytosol, endoplasmic reticulum 25.15 40.0
CDX84816 Canola cytosol 25.15 40.0
CDY23979 Canola endoplasmic reticulum 25.15 40.0
CDY23980 Canola cytosol 25.15 40.0
CDX80129 Canola cytosol 25.15 39.81
CDX93963 Canola cytosol 25.44 39.73
CDY50375 Canola cytosol, mitochondrion 24.56 39.44
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 25.15 39.27
CDX95731 Canola cytosol 24.56 39.07
CDY15444 Canola cytosol, mitochondrion 23.98 39.05
CDX89931 Canola cytosol, mitochondrion 23.68 38.57
CDY18131 Canola cytosol, mitochondrion 23.68 38.57
CDX89927 Canola cytosol 26.02 35.18
CDY07846 Canola cytosol 21.93 34.4
CDY37454 Canola cytosol, mitochondrion 24.85 33.86
CDY37204 Canola cytosol 25.15 33.86
CDY32486 Canola cytosol, mitochondrion 24.56 33.47
CDY71513 Canola plastid 24.56 31.82
CDY18136 Canola cytosol 26.02 26.73
CDY07850 Canola cytosol, plastid 24.56 25.23
GSMUA_Achr4P04940_001 Banana cytosol 28.36 21.27
CDX89928 Canola endoplasmic reticulum 0.88 1.24
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10GO:A0A078EPX2EnsemblPlants:CDY02724ProteinID:CDY02724ProteinID:CDY02724.1InterPro:DUF1218
GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00114878001InterPro:GST_CInterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043
PFAM:PF02798PFAM:PF06749PFscan:PS50404PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF18
SUPFAM:SSF47616SUPFAM:SSF52833TMHMM:TMhelixInterPro:Thioredoxin-like_sfUniParc:UPI0004EE1D7D:
Description
BnaC02g07110D
Coordinates
chrLK031936:-:1083597..1085630
Molecular Weight (calculated)
38143.3 Da
IEP (calculated)
5.432
GRAVY (calculated)
0.167
Length
342 amino acids
Sequence
(BLAST)
001: MMAQIIASVG SGCFCCRKGP APSRSKWIIS LICFIVSWFT FVIAFLVLLS GAALNDEHAE EAAFPDAYFC YTVGTGVFST GSVLSLVTIA LGIVYYLCLN
101: SSNQNVGVTR TVANQGGGIA MGQPQIPERG EDPVFVTAAC PQRVVLCFLE KEIEFEIVHV DLDTLEQKKS EHLLRQPFGQ VPAIEDGDFK LFESRAIARY
201: YATKYSNQGT NLLGKSLEHR AIVDQWADVE THYFNVLAFP IVLNLVIKPR LGEECDVVLV EELKAKLGVV LDIYENRLAS NRFLAGDEFT MADLTHMPAM
301: GYLMRTDVNQ MVKARVNMNR WWEEITARPA WKKLMKMAGF EA
Best Arabidopsis Sequence Match ( AT5G17220.1 )
(BLAST)
001: MVVKLYGQVT AACPQRVLLC FLEKGIEFEI IHIDLDTFEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKFAD QGTNLLGKSL EHRAIVDQWA
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH
Arabidopsis Description
GSTF12Glutathione S-transferase F12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE46]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.