CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69395	Canola	cytosol	96.71	96.71
CDX85469	Canola	cytosol, mitochondrion	90.14	89.3
CDY02726	Canola	cytosol	84.98	84.58
AT5G17220.1	Thale cress	cytosol	83.57	83.18
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	68.08	69.05
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	67.14	68.1
VIT_04s0079g00690.t01	Wine grape	mitochondrion	58.22	58.22
KRH30892	Soybean	cytosol	54.93	54.93
KRG97999	Soybean	cytosol	54.46	54.46
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	86.39	53.8
VIT_04s0079g00710.t01	Wine grape	cytosol	53.05	53.05
GSMUA_Achr4P11730_001	Banana	cytosol	52.11	50.23
CDY22058	Canola	cytosol, mitochondrion	44.13	44.13
CDX90933	Canola	cytosol	43.66	43.66
PGSC0003DMT400043105	Potato	cytosol, endoplasmic reticulum	46.95	43.48
CDY50374	Canola	cytosol, mitochondrion	43.19	43.19
CDX90934	Canola	cytosol, mitochondrion	43.19	43.19
CDY18015	Canola	cytosol	43.19	43.19
Solyc02g081340.2.1	Tomato	cytosol, endoplasmic reticulum	46.48	43.04
CDX93963	Canola	cytosol	44.13	42.92
CDY53015	Canola	cytosol	39.91	42.5
CDX97788	Canola	cytosol	42.72	42.33
CDY29636	Canola	cytosol	42.72	42.33
CDY18016	Canola	cytosol, mitochondrion	42.25	42.25
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.19	42.01
CDX84816	Canola	cytosol	42.25	41.86
CDY23979	Canola	endoplasmic reticulum	42.25	41.86
CDY23980	Canola	cytosol	42.25	41.86
CDX84815	Canola	cytosol, endoplasmic reticulum	41.31	40.93
CDX97273	Canola	cytosol, mitochondrion	40.85	40.85
CDY65569	Canola	cytosol, mitochondrion	40.85	40.85
CDY18131	Canola	cytosol, mitochondrion	39.91	40.48
CDY15444	Canola	cytosol, mitochondrion	38.97	39.52
CDX89931	Canola	cytosol, mitochondrion	38.97	39.52
CDX80129	Canola	cytosol	39.44	38.89
CDY50375	Canola	cytosol, mitochondrion	38.5	38.5
CDX95731	Canola	cytosol	38.5	38.14
CDX89927	Canola	cytosol	40.38	33.99
CDY07846	Canola	cytosol	34.27	33.49
CDY37204	Canola	cytosol	39.91	33.46
CDY37454	Canola	cytosol, mitochondrion	38.97	33.07
CDY32486	Canola	cytosol, mitochondrion	38.5	32.67
CDY71513	Canola	plastid	38.5	31.06
CDY18136	Canola	cytosol	39.91	25.53
CDY07850	Canola	cytosol, plastid	38.5	24.62
GSMUA_Achr4P04940_001	Banana	cytosol	47.89	22.37
CDX89928	Canola	endoplasmic reticulum	0.94	0.83
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	UniProt:A0A078FW10	EnsemblPlants:CDY16947	ProteinID:CDY16947	ProteinID:CDY16947.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00094875001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF18	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EB589C	SEG:seg	:	:	:

Description

BnaC09g40740DBnaC09g40740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW10]

Coordinates

chrLK032068:-:536368..537399

Molecular Weight (calculated)

24498.0 Da

IEP (calculated)

6.362

GRAVY (calculated)

-0.121

Length

213 amino acids

Sequence
(BLAST)

001: MVVKLYGQVT AACPQRVLLC LLEKKIEFEI VHIDLDTLEQ KRPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKYSD QGTNLLGKSL EHRAIVDQWA
101: DVEVGYFNVL VHPLVMNLVI KPRLGEECDA ALVEELKVKL GVVLDIYDNQ LASNRFLAGD EFTMADLTHM PAMGYLMRTD INRIVKDRAN MNRWWEEVTA
201: RPAWKKLMKM AGF

Best Arabidopsis Sequence Match ( AT5G17220.1 )
(BLAST)

001: MVVKLYGQVT AACPQRVLLC FLEKGIEFEI IHIDLDTFEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKFAD QGTNLLGKSL EHRAIVDQWA
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH

Arabidopsis Description

GSTF12Glutathione S-transferase F12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.