CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000460.1-P	Field mustard	cytosol	80.3	98.6
CDX95731	Canola	cytosol	79.92	98.14
CDY53015	Canola	cytosol	62.88	83.0
CDX80129	Canola	cytosol	66.67	81.48
AT2G47730.2	Thale cress	plastid	73.48	73.76
VIT_07s0005g00030.t01	Wine grape	cytosol	50.76	62.62
VIT_07s0005g00010.t01	Wine grape	cytosol	49.62	61.22
Solyc06g009020.2.1	Tomato	plastid	47.73	59.15
KRH71552	Soybean	cytosol	48.48	58.72
PGSC0003DMT400037918	Potato	cytosol	46.97	58.22
CDX89931	Canola	cytosol, mitochondrion	46.21	58.1
CDY18131	Canola	cytosol, mitochondrion	46.21	58.1
CDY15444	Canola	cytosol, mitochondrion	46.21	58.1
PGSC0003DMT400029561	Potato	cytosol	45.45	56.07
CDY65569	Canola	cytosol, mitochondrion	44.7	55.4
CDX97273	Canola	cytosol, mitochondrion	44.7	55.4
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.32	55.19
CDY50374	Canola	cytosol, mitochondrion	43.56	53.99
Solyc09g074850.2.1	Tomato	cytosol	40.53	53.5
CDY18015	Canola	cytosol	42.8	53.05
CDX90934	Canola	cytosol, mitochondrion	42.8	53.05
CDY18016	Canola	cytosol, mitochondrion	42.42	52.58
CDY22058	Canola	cytosol, mitochondrion	42.42	52.58
CDY50375	Canola	cytosol, mitochondrion	42.42	52.58
CDX90933	Canola	cytosol	42.42	52.58
CDY37454	Canola	cytosol, mitochondrion	44.32	46.61
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.64	46.58
CDY32486	Canola	cytosol, mitochondrion	43.94	46.22
CDY07846	Canola	cytosol	37.88	45.87
CDX93963	Canola	cytosol	37.5	45.21
CDX89927	Canola	cytosol	42.8	44.66
CDX85469	Canola	cytosol, mitochondrion	32.2	39.53
CDX97788	Canola	cytosol	31.44	38.6
CDY29636	Canola	cytosol	31.44	38.6
CDY16947	Canola	cytosol	31.06	38.5
CDY02726	Canola	cytosol	31.06	38.32
CDY37204	Canola	cytosol	36.74	38.19
CDY23980	Canola	cytosol	31.06	38.14
CDX84816	Canola	cytosol	31.06	38.14
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	30.3	38.1
CDX69395	Canola	cytosol	30.68	38.03
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	29.55	37.14
CDX84815	Canola	cytosol, endoplasmic reticulum	29.55	36.28
CDY23979	Canola	endoplasmic reticulum	29.17	35.81
CDY18136	Canola	cytosol	42.8	33.93
CDY07850	Canola	cytosol, plastid	42.8	33.93
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	31.82	24.56
CDX89928	Canola	endoplasmic reticulum	2.27	2.48
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	UniProt:A0A078JVB3	EnsemblPlants:CDY71513	ProteinID:CDY71513	ProteinID:CDY71513.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00016745001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE2CAE	SEG:seg	:	:	:

Description

BnaAnng37730DBnaAnng37730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVB3]

Coordinates

chrLK046166:-:292..2020

Molecular Weight (calculated)

29527.1 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.115

Length

264 amino acids

Sequence
(BLAST)

001: MITILQSQLL PPPPPIKLRH SSLLFSPSQH SRPNLKFTSK SSPSPPTITM ASIKVHGVPM STATMRVLAA LYEKDLEFEL IPVDMRAGAH KQEPFLSLNP
101: FGQIPALQDG DLTLFESRAI TEYIADEYSE KGEKLMCPGC NKAKALTKVW LNVEGQQFDP IASKIAFERI FKGMFGMTTD PAAVQELEGK LVRVLDIYEA
201: RLSKSEFLAC DCFTLADLHH LPVIHYLMGT DSKALFESRP KVCEWVKKIT ARPAWAKVVD LQKQ

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.