CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90934	Canola	cytosol, mitochondrion	98.59	98.59
Bra000876.1-P	Field mustard	cytosol, mitochondrion	98.12	98.12
CDY65569	Canola	cytosol, mitochondrion	86.39	86.39
CDX90933	Canola	cytosol	86.39	86.39
CDY50374	Canola	cytosol, mitochondrion	85.92	85.92
CDX97273	Canola	cytosol, mitochondrion	85.92	85.92
AT4G02520.1	Thale cress	cytosol, mitochondrion	85.45	85.85
AT2G02930.1	Thale cress	cytosol, mitochondrion	85.45	85.85
CDY22058	Canola	cytosol, mitochondrion	85.45	85.45
CDY50375	Canola	cytosol, mitochondrion	84.98	84.98
CDY18015	Canola	cytosol	84.51	84.51
CDY15444	Canola	cytosol, mitochondrion	74.65	75.71
CDY18131	Canola	cytosol, mitochondrion	74.18	75.24
CDX89931	Canola	cytosol, mitochondrion	73.24	74.29
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.69	58.96
VIT_07s0005g00010.t01	Wine grape	cytosol	59.15	58.88
PGSC0003DMT400037918	Potato	cytosol	58.69	58.69
Solyc06g009020.2.1	Tomato	plastid	58.22	58.22
VIT_07s0005g00030.t01	Wine grape	cytosol	57.28	57.01
PGSC0003DMT400029561	Potato	cytosol	55.87	55.61
CDY53015	Canola	cytosol	52.11	55.5
CDX80129	Canola	cytosol	55.87	55.09
Solyc09g074850.2.1	Tomato	cytosol	51.17	54.5
CDY07846	Canola	cytosol	53.52	52.29
CDX95731	Canola	cytosol	52.58	52.09
CDY37454	Canola	cytosol, mitochondrion	57.75	49.0
CDY32486	Canola	cytosol, mitochondrion	57.28	48.61
CDX89927	Canola	cytosol	57.28	48.22
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.48	45.21
CDX93963	Canola	cytosol	46.01	44.75
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	43.19	43.81
CDX85469	Canola	cytosol, mitochondrion	44.13	43.72
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	42.25	42.86
CDY02726	Canola	cytosol	42.72	42.52
CDY71513	Canola	plastid	52.58	42.42
CDY16947	Canola	cytosol	42.25	42.25
CDX69395	Canola	cytosol	41.78	41.78
CDX97788	Canola	cytosol	41.78	41.4
CDY29636	Canola	cytosol	41.31	40.93
CDY23980	Canola	cytosol	40.85	40.47
CDX84816	Canola	cytosol	40.85	40.47
CDY37204	Canola	cytosol	46.95	39.37
CDX84815	Canola	cytosol, endoplasmic reticulum	37.56	37.21
CDY23979	Canola	endoplasmic reticulum	37.09	36.74
CDY18136	Canola	cytosol	56.81	36.34
CDY07850	Canola	cytosol, plastid	56.81	36.34
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	43.19	26.9
CDX89928	Canola	endoplasmic reticulum	2.82	2.48
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	UniProt:A0A078FYG7	EnsemblPlants:CDY18016	ProteinID:CDY18016	ProteinID:CDY18016.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00002404001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EC861D	SEG:seg	:	:	:

Description

BnaC03g30880DBnaC03g30880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYG7]

Coordinates

chrLK032080:+:544282..552684

Molecular Weight (calculated)

24236.2 Da

IEP (calculated)

7.191

GRAVY (calculated)

-0.278

Length

213 amino acids

Sequence
(BLAST)

001: MAGIKVFGHA ASISTRRVLL TLHEKNLDFE LVHVDLKDGE HKKESFLSHN PFGKVPAFED GDLKIFESRA ITQYIAHRYE GQGTNLLQPD SKNLAHYAIM
101: AMGMQVEAHQ FDPLASKLAW EHVFKLIYGL TTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGDTFTLTD LHHIPAVQYL LETPTKKLFT ERPHVNKWVA
201: EITKRPASQK ILQ

Best Arabidopsis Sequence Match ( AT4G02520.1 )
(BLAST)

001: MAGIKVFGHP ASIATRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLQTD SKNISQYAIM
101: AIGMQVEDHQ FDPVASKLAF EQIFKSIYGL TTDEAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPAIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VQ

Arabidopsis Description

GSTF2Glutathione S-transferase F2 [Source:UniProtKB/Swiss-Prot;Acc:P46422]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.