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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G02520.1 Thale cress cytosol, mitochondrion 92.45 92.45
Bra036260.1-P Field mustard cytosol, mitochondrion 90.57 90.14
CDX97273 Canola cytosol, mitochondrion 88.21 87.79
Bra018543.1-P Field mustard cytosol, mitochondrion 88.21 87.79
CDY50375 Canola cytosol, mitochondrion 88.21 87.79
CDY65569 Canola cytosol, mitochondrion 88.21 87.79
CDY50374 Canola cytosol, mitochondrion 87.74 87.32
Bra036259.1-P Field mustard cytosol, mitochondrion 87.74 87.32
CDY22058 Canola cytosol, mitochondrion 87.26 86.85
CDY18015 Canola cytosol 86.32 85.92
CDX90934 Canola cytosol, mitochondrion 86.32 85.92
CDX90933 Canola cytosol 86.32 85.92
CDY18016 Canola cytosol, mitochondrion 85.85 85.45
Bra000875.1-P Field mustard cytosol 85.85 85.45
Bra000876.1-P Field mustard cytosol, mitochondrion 85.85 85.45
AT1G02920.1 Thale cress cytosol 73.58 74.64
AT1G02930.1 Thale cress cytosol 73.11 74.52
PGSC0003DMT400037918 Potato cytosol 60.85 60.56
Solyc06g009040.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 60.38 60.38
Solyc06g009020.2.1 Tomato plastid 60.38 60.09
VIT_07s0005g00010.t01 Wine grape cytosol 60.38 59.81
VIT_07s0005g00030.t01 Wine grape cytosol 59.43 58.88
PGSC0003DMT400029561 Potato cytosol 58.49 57.94
Solyc09g074850.2.1 Tomato cytosol 52.83 56.0
AT1G02950.5 Thale cress cytosol 58.96 49.02
AT2G47730.2 Thale cress plastid 57.08 46.01
AT3G03190.1 Thale cress cytosol 44.81 44.39
AT3G62760.1 Thale cress cytosol 45.28 43.84
AT1G49860.1 Thale cress cytosol 48.11 40.16
AT5G17220.1 Thale cress cytosol 40.09 39.72
AT1G02940.2 Thale cress endoplasmic reticulum 51.42 38.79
AT2G30860.1 Thale cress cytosol 39.15 38.6
AT2G30870.1 Thale cress endoplasmic reticulum, vacuole 37.74 37.21
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10EntrezGene:814822ProteinID:AAC32912.1ProteinID:AEC05642.1EMBL:AF288181EMBL:AK229226
ArrayExpress:AT2G02930EnsemblPlantsGene:AT2G02930RefSeq:AT2G02930TAIR:AT2G02930RefSeq:AT2G02930-TAIR-GEnsemblPlants:AT2G02930.1
TAIR:AT2G02930.1Symbol:ATGSTF3EMBL:BT024921GO:GO:0002239GO:GO:0003674GO:GO:0003824
GO:GO:0004364GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005829GO:GO:0005886GO:GO:0006749GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009407GO:GO:0009605GO:GO:0009607GO:GO:0009636GO:GO:0009987
GO:GO:0016020GO:GO:0016740GO:GO:0019748InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987RefSeq:NP_178394.1PFAM:PF00043
PFAM:PF02798PO:PO:0000293PO:PO:0005417PO:PO:0009025PFscan:PS50404PFscan:PS50405
PANTHER:PTHR43900PANTHER:PTHR43900:SF7UniProt:Q9SLM6SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI00000484DFSEG:seg::::
Description
GSTF3Glutathione S-transferase F3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLM6]
Coordinates
chr2:-:851156..852321
Molecular Weight (calculated)
24121.9 Da
IEP (calculated)
6.732
GRAVY (calculated)
-0.308
Length
212 amino acids
Sequence
(BLAST)
001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.