Factsheet for Bra018543.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65569	Canola	cytosol, mitochondrion	100.0	100.0
CDX97273	Canola	cytosol, mitochondrion	99.53	99.53
AT2G02930.1	Thale cress	cytosol, mitochondrion	87.79	88.21
Bra036260.1-P	Field mustard	cytosol, mitochondrion	87.79	87.79
Bra036259.1-P	Field mustard	cytosol, mitochondrion	86.85	86.85
AT4G02520.1	Thale cress	cytosol, mitochondrion	85.92	86.32
Bra000876.1-P	Field mustard	cytosol, mitochondrion	85.45	85.45
Bra000875.1-P	Field mustard	cytosol	84.04	84.04
Bra030515.1-P	Field mustard	cytosol, mitochondrion	78.87	80.0
Bra033358.1-P	Field mustard	cytosol, mitochondrion	77.0	78.1
PGSC0003DMT400037918	Potato	cytosol	62.44	62.44
Solyc06g009020.2.1	Tomato	plastid	61.97	61.97
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.09	60.38
VIT_07s0005g00010.t01	Wine grape	cytosol	60.09	59.81
VIT_07s0005g00030.t01	Wine grape	cytosol	58.69	58.41
PGSC0003DMT400029561	Potato	cytosol	58.69	58.41
Bra004434.1-P	Field mustard	cytosol	53.99	57.5
Solyc09g074850.2.1	Tomato	cytosol	52.11	55.5
Bra000460.1-P	Field mustard	cytosol	54.93	54.42
Bra024517.1-P	Field mustard	cytosol	42.72	51.12
Bra032578.1-P	Field mustard	cytosol	56.34	49.38
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.48	45.21
Bra033361.1-P	Field mustard	cytosol	39.44	44.92
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	42.72	43.33
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	42.72	42.33
Bra033359.1-P	Field mustard	endoplasmic reticulum	47.42	40.73
Bra008570.1-P	Field mustard	cytosol	40.38	40.38
Bra021673.1-P	Field mustard	cytosol, mitochondrion	39.91	39.53
Bra022815.1-P	Field mustard	cytosol	39.44	39.07
Bra037204.1-P	Field mustard	cytosol	46.48	38.98
Bra022816.1-P	Field mustard	endoplasmic reticulum	36.62	36.28
Bra033360.1-P	Field mustard	endoplasmic reticulum	2.35	2.54

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	ProteinID:AAK94428	ProteinID:AAK94428.1	ProteinID:AAV80208	ProteinID:AAV80208.1	EMBL:AF398147
EMBL:AY567976	EnsemblPlantsGene:Bra018543	EnsemblPlants:Bra018543.1	EnsemblPlants:Bra018543.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	UniProt:Q5DNA8	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00001A9BDA	:	:	:

Description

AT2G02930 (E=9e-107) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase

Coordinates

chrA05:+:9082092..9082916

Molecular Weight (calculated)

24293.0 Da

IEP (calculated)

5.948

GRAVY (calculated)

-0.284

Length

213 amino acids

Sequence
(BLAST)

001: MAGIKVFGHA ASTATRRVLL TLHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGKVPAFED GDLKLFESRA ITQYIAHRYE EEGTNLLPAD SKNISHYAIM
101: AIGMEVEAHH FDPVASKLAW EQVFKLFYGM TTDQAVVEEE EAKLATVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFD ERPHVSEWVA
201: EITNRPASQK ILQ

Best Arabidopsis Sequence Match ( AT2G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL

Arabidopsis Description

GSTF3Glutathione S-transferase F3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLM6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.