Factsheet for Bra000875.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90933	Canola	cytosol	99.53	99.53
AT2G02930.1	Thale cress	cytosol, mitochondrion	85.45	85.85
Bra036259.1-P	Field mustard	cytosol, mitochondrion	85.45	85.45
Bra000876.1-P	Field mustard	cytosol, mitochondrion	84.98	84.98
Bra018543.1-P	Field mustard	cytosol, mitochondrion	84.04	84.04
AT4G02520.1	Thale cress	cytosol, mitochondrion	83.57	83.96
Bra036260.1-P	Field mustard	cytosol, mitochondrion	83.57	83.57
Bra030515.1-P	Field mustard	cytosol, mitochondrion	71.36	72.38
Bra033358.1-P	Field mustard	cytosol, mitochondrion	69.95	70.95
VIT_07s0005g00010.t01	Wine grape	cytosol	61.97	61.68
VIT_07s0005g00030.t01	Wine grape	cytosol	60.09	59.81
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.15	59.43
PGSC0003DMT400037918	Potato	cytosol	58.69	58.69
Solyc06g009020.2.1	Tomato	plastid	58.22	58.22
PGSC0003DMT400029561	Potato	cytosol	57.75	57.48
Solyc09g074850.2.1	Tomato	cytosol	52.58	56.0
Bra004434.1-P	Field mustard	cytosol	52.11	55.5
Bra000460.1-P	Field mustard	cytosol	52.11	51.63
Bra024517.1-P	Field mustard	cytosol	41.31	49.44
Bra032578.1-P	Field mustard	cytosol	53.99	47.33
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	46.01	46.67
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	45.54	45.12
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.54	44.29
Bra008570.1-P	Field mustard	cytosol	43.19	43.19
Bra033361.1-P	Field mustard	cytosol	37.56	42.78
Bra021673.1-P	Field mustard	cytosol, mitochondrion	42.72	42.33
Bra022815.1-P	Field mustard	cytosol	42.25	41.86
Bra033359.1-P	Field mustard	endoplasmic reticulum	48.36	41.53
Bra037204.1-P	Field mustard	cytosol	45.54	38.19
Bra022816.1-P	Field mustard	endoplasmic reticulum	38.03	37.67
Bra033360.1-P	Field mustard	endoplasmic reticulum	2.35	2.54

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra000875	EnsemblPlants:Bra000875.1	EnsemblPlants:Bra000875.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4C9J6	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI00025405A1	:	:	:	:	:

Description

AT2G02930 (E=6e-103) ATGSTF3, GST16 | ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase

Coordinates

chrA03:+:13641766..13642884

Molecular Weight (calculated)

24002.1 Da

IEP (calculated)

7.374

GRAVY (calculated)

-0.241

Length

213 amino acids

Sequence
(BLAST)

001: MAGIKVFGHP ASAPTMRVLL TLHEKNLDFE FVHVDLMGGE HKKEAFLARN PFGQVPAFED GDLKLFESRA ITQYIAHRYE GQGTNLLPAD SKNIAHYAIM
101: AIGMQVEAHQ FEPVAAKLVS EQVFKLKKGL TTDQAVVAEE EAKLDKVLDV YEARLKEFKY LAGDTFTLTD LHHIPTVKYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASQK ILQ

Best Arabidopsis Sequence Match ( AT2G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL

Arabidopsis Description

GSTF3Glutathione S-transferase F3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLM6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.