Factsheet for Bra000460.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95731	Canola	cytosol	98.6	98.6
Bra004434.1-P	Field mustard	cytosol	75.35	81.0
CDY71513	Canola	plastid	98.6	80.3
AT2G47730.2	Thale cress	plastid	83.26	68.06
VIT_07s0005g00030.t01	Wine grape	cytosol	62.33	62.62
VIT_07s0005g00010.t01	Wine grape	cytosol	60.47	60.75
KRH71552	Soybean	cytosol	59.53	58.72
Solyc06g009020.2.1	Tomato	plastid	57.67	58.22
Bra033358.1-P	Field mustard	cytosol, mitochondrion	56.74	58.1
PGSC0003DMT400037918	Potato	cytosol	56.74	57.28
Bra030515.1-P	Field mustard	cytosol, mitochondrion	55.81	57.14
PGSC0003DMT400029561	Potato	cytosol	54.88	55.14
Bra018543.1-P	Field mustard	cytosol, mitochondrion	54.42	54.93
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.95	54.72
Bra036260.1-P	Field mustard	cytosol, mitochondrion	53.49	53.99
Bra000876.1-P	Field mustard	cytosol, mitochondrion	52.09	52.58
Bra036259.1-P	Field mustard	cytosol, mitochondrion	52.09	52.58
Solyc09g074850.2.1	Tomato	cytosol	48.84	52.5
Bra000875.1-P	Field mustard	cytosol	51.63	52.11
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.44	46.58
Bra032578.1-P	Field mustard	cytosol	52.56	46.5
Bra033359.1-P	Field mustard	endoplasmic reticulum	49.3	42.74
Bra024517.1-P	Field mustard	cytosol	33.95	41.01
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	39.53	39.53
Bra033361.1-P	Field mustard	cytosol	33.49	38.5
Bra008570.1-P	Field mustard	cytosol	37.67	38.03
Bra037204.1-P	Field mustard	cytosol	44.65	37.8
Bra022815.1-P	Field mustard	cytosol	37.67	37.67
Bra021673.1-P	Field mustard	cytosol, mitochondrion	37.67	37.67
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	36.28	37.14
Bra022816.1-P	Field mustard	endoplasmic reticulum	35.81	35.81
Bra033360.1-P	Field mustard	endoplasmic reticulum	2.79	3.05

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra000460	EnsemblPlants:Bra000460.1	EnsemblPlants:Bra000460.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4C8D2	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000253FF3A	:	:	:	:	:

Description

AT2G47730 (E=1e-102) ATGSTF8, ATGSTF5, GST6, GSTF8 | ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8); glutathione binding / glutathione transferase

Coordinates

chrA03:+:11213249..11214131

Molecular Weight (calculated)

24168.5 Da

IEP (calculated)

6.358

GRAVY (calculated)

-0.067

Length

215 amino acids

Sequence
(BLAST)

001: MASIKVHGVP MSTATMRVLA ALYEKELEFE LIPVDMRAGA HKQEPFLSLN PFGQIPALQD GDLTLFESRA ITEYIGDEYS EKGEKLMCPG CNKVKALTKV
101: WLNVEGQQFD PIASKIAFER IFKGMFGMTT DPAAVQELEG KLVRVLDIYE ARLSKSEFLA CDCFTLADLH HLPVIHYLMG TDSKALFESR PKVCEWVKKI
201: TARPAWAKVV DLQKQ

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.